Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-2 1 CH_aar_71 13 23 0.000000186875
Carica papaya supercontig_103 1 CH_cpa_247 11 32 0.000142119
Chenopodium quinoa C_Quinoa_Scaffold_1862 1 CH_cqu_599 7 10 0.000882433
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_420 9 23 0.000333916
Glycine max Gm03 1 CH_gma_306 10 17 0.0000202829
Quercus lobata 5 1 CH_qlo_626 9 15 0.0000371794
Selaginella moellendorffii scaffold_0 1 CH_smo_87 7 10 0.0000833096
Aethionema arabicum LG-2 2 CH_aar_71 13 23 0.000000186875
Carica papaya supercontig_103 2 CH_cpa_247 11 32 0.000142119
Chenopodium quinoa C_Quinoa_Scaffold_1862 2 CH_cqu_599 7 10 0.000882433
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_420 9 23 0.000333916
Glycine max Gm03 2 CH_gma_306 10 17 0.0000202829
Quercus lobata 5 2 CH_qlo_626 9 15 0.0000371794
Selaginella moellendorffii scaffold_0 2 CH_smo_87 7 10 0.0000833096

Available child term results

Ontology identifier Description Number of clusters
19.1 Protein homeostasis.protein quality control 2
19.1.1.1.1.1 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.CNX-CRT cycle.lectin chaperone (CNX) 14
19.1.1.1.1.2 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.CNX-CRT cycle.lectin chaperone (CRT) 16
19.1.1.1.2 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.UDP-glucose glycoprotein glucosyltransferase (UGGT) 20
19.1.1.2.1.1 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.BiP chaperone system.ERdj3B-BiP-SDF2 chaperone complex.chaperone component BiP 34
19.1.1.2.1.2 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.BiP chaperone system.ERdj3B-BiP-SDF2 chaperone complex.co-chaperone component ERdj3a 6
19.1.1.2.1.3 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.BiP chaperone system.ERdj3B-BiP-SDF2 chaperone complex.component SDF2 2
19.1.1.2.2 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.BiP chaperone system.co-chaperone (ERdj3a) 5
19.1.1.2.3 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.BiP chaperone system.co-chaperone (P58/ERdj6) 4
19.1.1.2.4 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.BiP chaperone system.co-chaperone (ERdj7) 6
19.1.1.2.5 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.BiP chaperone system.nucleotide exchange factor (Grp170) 4
19.1.1.2.6 Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.BiP chaperone system.nucleotide exchange factor (Sil1) 2
19.1.2 Protein homeostasis.protein quality control.ribosome-associated chaperone activities 2
19.1.2.1.1 Protein homeostasis.protein quality control.ribosome-associated chaperone activities.NAC chaperone heterodimer.subunit alpha 37
19.1.2.1.2 Protein homeostasis.protein quality control.ribosome-associated chaperone activities.NAC chaperone heterodimer.subunit beta 37
19.1.2.2 Protein homeostasis.protein quality control.ribosome-associated chaperone activities.co-chaperone (Jjj1) 12
19.1.2.3 Protein homeostasis.protein quality control.ribosome-associated chaperone activities.co-chaperone (ZRF) 21
19.1.3.3 Protein homeostasis.protein quality control.mitochondrial Hsp70 chaperone system.nucleotide exchange factor (MGE) 4
19.1.4.1 Protein homeostasis.protein quality control.plastidial Hsp70 chaperone system.chaperone (cpHsc70) 18
19.1.4.2 Protein homeostasis.protein quality control.plastidial Hsp70 chaperone system.co-chaperone (Hsp40) 2
19.1.4.3 Protein homeostasis.protein quality control.plastidial Hsp70 chaperone system.nucleotide exchange factor (CGE) 8
19.1.5.1 Protein homeostasis.protein quality control.cytosolic Hsp70 chaperone system.chaperone (Hsp70) 52
19.1.5.2 Protein homeostasis.protein quality control.cytosolic Hsp70 chaperone system.co-chaperone (Hsp40) 6
19.1.5.3 Protein homeostasis.protein quality control.cytosolic Hsp70 chaperone system.nucleotide exchange factor (FES1) 6
19.1.6 Protein homeostasis.protein quality control.Hsp90 chaperone system 4
19.1.6.1 Protein homeostasis.protein quality control.Hsp90 chaperone system.chaperone (Hsp90) 22
19.1.6.2 Protein homeostasis.protein quality control.Hsp90 chaperone system.Hsp90-co-chaperone (P23) 6
19.1.6.3 Protein homeostasis.protein quality control.Hsp90 chaperone system.Hsp90-co-chaperone (SGT1) 6
19.1.7.3 Protein homeostasis.protein quality control.Hsp60 chaperone system.Hsp60-co-chaperone (Hsp10) 10
19.1.8 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities 8
19.1.8.1 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-C-I protein 180
19.1.8.10 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-PX protein 2
19.1.8.11 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-P protein 2
19.1.8.12 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-ER protein 15
19.1.8.2 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-C-II protein 127
19.1.8.5 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-C-V protein 2
19.1.8.6 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-C-VI protein 2
19.1.8.7 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-C-VII protein 8
19.1.8.8 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-M-I protein 20
19.1.8.9 Protein homeostasis.protein quality control.smallHsp holdase chaperone activities.class-M-II protein 6
19.2 Protein homeostasis.ubiquitin-proteasome system 4
19.2.1.1.1.1 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Ac/N-degron pathway.Doa10 E3 ubiquitin ligase complex.E3 ubiquitin ligase component Doa10 38
19.2.1.1.1.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Ac/N-degron pathway.Doa10 E3 ubiquitin ligase complex.E2 ubiquitin-conjugating component Ubc32 2
19.2.1.2.1.1 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.N-terminal modification.cysteine oxidase (PCO) 14
19.2.1.2.1.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.N-terminal modification.arginyl-tRNA-protein transferase (ATE) 16
19.2.1.2.1.3 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.N-terminal modification.Nt-glutamine amidase (NTAQ) 4
19.2.1.2.1.4 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.N-terminal modification.Nt-asparagine amidase (NTAN) 4
19.2.1.2.2.1 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-I-residues E3 ubiquitin ligase (PRT6) 8
19.2.1.2.2.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-II-residues E3 ubiquitin ligase (PRT1) 21
19.2.1.3.1.1 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component RanBPM/GID1 10
19.2.1.3.1.2 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin ligase component GID2 4
19.2.1.3.1.3 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.ubiquitin-conjugating component GID3 17
19.2.1.3.1.4 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.N-recognin component GID4/GID10 8
19.2.1.3.1.5 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID5 12
19.2.1.3.1.6 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.deubiquitinase component (GID6/UBP14) 7
19.2.1.3.1.7 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID7 11
19.2.1.3.1.8 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID8 1
19.2.1.3.1.9 Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID9 4
19.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation 12
19.2.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation) 6
19.2.2.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ) 37
19.2.2.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-activating E1 protein (UBA) 32
19.2.2.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC) 6
19.2.2.1.4.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT) 19
19.2.2.1.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities 6
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase 16
19.2.2.1.4.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-III ligase 58
19.2.2.1.4.2.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.bifunctional co-chaperone and E3 ubiquitin ligase (CHIP) 8
19.2.2.1.4.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities 6
19.2.2.1.4.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-C2-class E3 ligase 4
19.2.2.1.4.3.10 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (LOG2/LUL) 5
19.2.2.1.4.3.11 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (BRG) 12
19.2.2.1.4.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase 38
19.2.2.1.4.3.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities 2
19.2.2.1.4.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase 158
19.2.2.1.4.3.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.BTL-subclass ligase 4
19.2.2.1.4.3.3.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.CTL-subclass ligase 11
19.2.2.1.4.3.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (BRIZ) 4
19.2.2.1.4.3.3.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RIN) 12
19.2.2.1.4.3.3.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RFI2) 26
19.2.2.1.4.3.3.7 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (RIE1) 9
19.2.2.1.4.3.3.8 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (BRH) 18
19.2.2.1.4.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-v-class E3 ligase 4
19.2.2.1.4.3.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SINA) 48
19.2.2.1.4.3.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (DA2) 8
19.2.2.1.4.3.7 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (PIR) 16
19.2.2.1.4.3.8 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (FLY) 6
19.2.2.1.4.3.9 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SNIPER) 7
19.2.2.1.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities 2
19.2.2.1.4.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Ariadne) 45
19.2.2.1.4.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (ARA54) 15
19.2.2.1.4.4.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Helicase) 2
19.2.2.1.4.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA) 142
19.2.2.1.5.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.Ubc13-Uev1 conjugating E2 complex.component Ubc13 19
19.2.2.1.5.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.Ubc13-Uev1 conjugating E2 complex.component Uev1 16
19.2.2.1.5.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.ligating E3 protein (RGLG) 33
19.2.2.1.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin receptor regulatory protein (DA1) 34
19.2.2.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).ubiquitin-fold protein (SUMO) 59
19.2.2.2.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO activating E1 heterodimer.large component SAE2 8
19.2.2.2.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO conjugation E2 enzyme (SCE1) 9
19.2.2.2.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO E3 ligase activities.E3 ligase (SIZ1) 16
19.2.2.2.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO E3 ligase activities.E3 ligase (HPY2/NSE2) 6
19.2.2.2.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO chain-forming-ligase E4 enzyme (PIAL) 11
19.2.2.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).ubiquitin-fold protein (RUB) 4
19.2.2.3.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB activating E1 heterodimer.small component AXR1/AXL 13
19.2.2.3.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB conjugation E2 protein (RCE1) 6
19.2.2.3.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) 5
19.2.2.3.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.RUB/NEDD8 conjugation (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (DCN1) 2
19.2.2.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.HUB conjugation.ubiquitin-fold protein (HUB) 7
19.2.2.5.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.MUB conjugation.ubiquitin-fold protein (MUB) 4
19.2.2.5.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.MUB conjugation.conjugation E2 protein 20
19.2.2.6.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.UFM conjugation.UFM-conjugation E2 protein 6
19.2.2.6.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.UFM conjugation.UFM-ligase E3 protein 8
19.2.2.8 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes 2
19.2.2.8.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes 16
19.2.2.8.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.scaffold component CUL1/CUL2 30
19.2.2.8.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.target protein binding component SKP1/ASK1 153
19.2.2.8.1.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities 6
19.2.2.8.1.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (UFO) 6
19.2.2.8.1.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (EDL) 2
19.2.2.8.1.4.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (FBX) 254
19.2.2.8.1.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (RAE-like) 2
19.2.2.8.1.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.adaptor protein exchange factor (CAND1) 8
19.2.2.8.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.scaffold component CUL3 9
19.2.2.8.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities 8
19.2.2.8.2.2.11 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (SETH6) 6
19.2.2.8.2.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substate adaptor (LRB) 24
19.2.2.8.2.2.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substate adaptor (FBL) 12
19.2.2.8.2.2.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substate adaptor (BT) 13
19.2.2.8.2.2.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (BPM) 21
19.2.2.8.2.2.7 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (AHT) 51
19.2.2.8.2.2.8 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (NPY) 2
19.2.2.8.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.core adapter component DDB1 4
19.2.2.8.3.3.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.COP10-DET1 module.E2 conjugating enzyme variant component COP10 2
19.2.2.8.3.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.COP10-DET1 module.regulator component DET1 2
19.2.2.8.3.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.substrate adaptor (OZS3) 8
19.2.2.8.3.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.substrate adaptor (ABD1) 6
19.2.2.8.3.4.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.COP1-SPA substrate adaptor subcomplex.component COP1 6
19.2.2.8.3.4.4.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.COP1-SPA substrate adaptor subcomplex.regulator component SPA 2
19.2.3.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities 4
19.2.3.1.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP1-2) 6
19.2.3.1.1.11 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP26) 9
19.2.3.1.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP3-4) 6
19.2.3.1.1.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP5/8-11) 12
19.2.3.1.1.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP6-7) 12
19.2.3.1.1.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP12-13) 18
19.2.3.1.1.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP15-21) 2
19.2.3.1.1.8 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP23) 4
19.2.3.1.1.9 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP24) 4
19.2.3.1.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU2) 2
19.2.3.1.2.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU3-4) 8
19.2.3.1.2.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU5) 8
19.2.3.1.2.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.OTU deubiquitinase activities.deubiquitinase (OTU6-12) 4
19.2.3.1.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UCH deubiquitinase activities.deubiquitinase (UCH3) 10
19.2.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.SUMO deconjugation 2
19.2.3.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.SUMO deconjugation.protease (SPF) 4
19.2.3.2.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.SUMO deconjugation.protease (FUG) 6
19.2.3.2.5 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.SUMO deconjugation.peptidase (DeSI) 3
19.2.3.3.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN1 8
19.2.3.3.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN2 8
19.2.3.3.1.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN4 2
19.2.3.3.1.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN6 2
19.2.3.3.1.7 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN7 8
19.2.3.3.1.8 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN8 15
19.2.3.3.2.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.deneddylase activities.deneddylase (DEN1) 8
19.2.4.1.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.platform ATPase component CDC48 13
19.2.4.1.2 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.component UFD1 15
19.2.4.1.3 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.component NPL4 2
19.2.4.2.1.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.E3 ubiquitin ligase component HRD1 6
19.2.4.2.1.2 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.E2 ubiquitin-conjugating component Ubc7/13/14 6
19.2.4.2.1.3 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.adaptor protein component HRD3 13
19.2.4.2.1.4 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.substrate recruitment component OS9 1
19.2.4.2.1.6 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.associated plant-specific component PAWH 10
19.2.4.2.2.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).substrate extraction.substrate-to-CDC48 bridging factor (PUX1) 2
19.2.4.2.2.2 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).substrate extraction.membrane protein retrotranslocase (DFM1) 12
19.2.4.2.3.2 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).substrate processing.ubiquitin-binding adaptor (UFD3) 4
19.2.4.2.3.4 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).substrate processing.deglycosylating peptide:N-glycanase (PNG1) 11
19.2.4.2.4.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (RAD23) 12
19.2.4.2.4.2 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (DDI1) 6
19.2.4.2.4.3 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (DSK2) 18
19.2.4.3.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.chloroplast-associated protein degradation (CHLORAD).E3 ubiquitin protein ligase (SP1) 10
19.2.4.5.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.inner nuclear membrane-associated protein degradation (INMAD).substrate-to-CDC48 bridging factor (PUX3/4/5) 6
19.2.5.1.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components 2
19.2.5.1.1.2 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-2 4
19.2.5.1.1.3 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-3 4
19.2.5.1.1.4 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-4 6
19.2.5.1.1.5 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-5 2
19.2.5.1.1.6 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-6 4
19.2.5.1.1.7 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.alpha-type components.component alpha type-7 4
19.2.5.1.2.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-1 2
19.2.5.1.2.2 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-2 6
19.2.5.1.2.4 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-4 4
19.2.5.1.2.5 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-5 2
19.2.5.1.2.6 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-6 8
19.2.5.1.2.7 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.20S core particle.beta-type components.component beta type-7 1
19.2.5.2.1.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT1 12
19.2.5.2.1.2 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT2 8
19.2.5.2.1.3 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT3 14
19.2.5.2.1.4 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT4 16
19.2.5.2.1.5 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT5 6
19.2.5.2.1.6 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT6 12
19.2.5.2.2 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components 2
19.2.5.2.2.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN1 14
19.2.5.2.2.10 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN11 21
19.2.5.2.2.11 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN12 3
19.2.5.2.2.12 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN13 7
19.2.5.2.2.2 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN2 6
19.2.5.2.2.3 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN3 18
19.2.5.2.2.4 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN5 10
19.2.5.2.2.5 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN6 10
19.2.5.2.2.6 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN7 6
19.2.5.2.2.7 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN8 4
19.2.5.2.2.8 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN9 8
19.2.5.2.2.9 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN10 2
19.2.5.3.1 Protein homeostasis.ubiquitin-proteasome system.26S proteasome.regulation.regulatory protein (PTRE1) 4
19.3.1 Protein homeostasis.autophagy.initiation complex 6
19.3.1.1 Protein homeostasis.autophagy.initiation complex.kinase component ATG1 2
19.3.1.2 Protein homeostasis.autophagy.initiation complex.accessory component ATG13 12
19.3.1.3 Protein homeostasis.autophagy.initiation complex.multifunctional scaffold component ATG11 4
19.3.1.4 Protein homeostasis.autophagy.initiation complex.accessory component ATG101 6
19.3.2.2 Protein homeostasis.autophagy.nucleation complexes.regulatory component VPS30/ATG6 3
19.3.2.3 Protein homeostasis.autophagy.nucleation complexes.auxiliary ATG6-stability component TRAF1 27
19.3.2.4 Protein homeostasis.autophagy.nucleation complexes.regulatory kinase component VPS15 12
19.3.2.5 Protein homeostasis.autophagy.nucleation complexes.complex-I component ATG14 6
19.3.2.6 Protein homeostasis.autophagy.nucleation complexes.complex-II component VPS38/UVRAG 8
19.3.3.1.1 Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (ATI1/2) 2
19.3.3.1.2 Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (NBR1) 25
19.3.3.1.3 Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (ATI3) 17
19.3.3.1.4 Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (PUX7/8/9/13) 16
19.3.3.3.1 Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.ubiquitin-fold protein (ATG12) 2
19.3.3.3.2 Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.regulatory factor (ATG5) 6
19.3.3.3.3 Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.regulatory factor (ATG16) 4
19.3.3.3.4 Protein homeostasis.autophagy.phagophore expansion.ATG12-ATG5-ATG16 conjugation system.ATG12-conjugation E2 protein (ATG10) 4
19.3.3.4.1 Protein homeostasis.autophagy.phagophore expansion.ATG8-phosphatidylethanolamine conjugation system.ubiquitin-fold protein (ATG8) 8
19.3.3.4.2 Protein homeostasis.autophagy.phagophore expansion.ATG8-phosphatidylethanolamine conjugation system.ATG8-maturation peptidase (ATG4) 4
19.3.3.4.3 Protein homeostasis.autophagy.phagophore expansion.ATG8-phosphatidylethanolamine conjugation system.ATG8-conjugation E2 protein (ATG3) 8
19.3.3.5.1.1 Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-2-18 membrane-recruiting complex.component ATG9 8
19.3.3.5.1.2 Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-2-18 membrane-recruiting complex.component ATG2 14
19.3.3.5.1.3 Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-2-18 membrane-recruiting complex.component ATG18 16
19.3.3.5.2 Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-transport factor (ATG27) 4
19.4 Protein homeostasis.proteolysis 25
19.4.1 Protein homeostasis.proteolysis.cysteine-type peptidase activities 2
19.4.1.1 Protein homeostasis.proteolysis.cysteine-type peptidase activities.C1-class protease (Papain) 217
19.4.1.2 Protein homeostasis.proteolysis.cysteine-type peptidase activities.C2-class calcium-activated protease (Phytocalpain) 8
19.4.1.3 Protein homeostasis.proteolysis.cysteine-type peptidase activities.C13-class asparaginyl endopeptidase (Legumain) 64
19.4.1.4 Protein homeostasis.proteolysis.cysteine-type peptidase activities.C15-class pyrrolidone-carboxylate peptidase 13
19.4.1.5 Protein homeostasis.proteolysis.cysteine-type peptidase activities.C26-class gamma-glutamyl peptidase 55
19.4.1.6 Protein homeostasis.proteolysis.cysteine-type peptidase activities.C50-class protease separase (AESP) 2
19.4.1.7 Protein homeostasis.proteolysis.cysteine-type peptidase activities.C97-class peptidase (PPPDE) 4
19.4.2 Protein homeostasis.proteolysis.serine-type peptidase activities 20
19.4.2.1 Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families 22
19.4.2.1.1 Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT1) 70
19.4.2.1.2 Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT2) 6
19.4.2.1.3 Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT3) 53
19.4.2.1.4 Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT4) 128
19.4.2.1.5 Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT5) 59
19.4.2.1.6 Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT6.1) 12
19.4.2.1.7 Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT6.2) 23
19.4.2.10 Protein homeostasis.proteolysis.serine-type peptidase activities.S9-class plastidial glutamyl peptidase (CGEP) 16
19.4.2.2 Protein homeostasis.proteolysis.serine-type peptidase activities.S10-class serine carboxypeptidase (SCPL) 450
19.4.2.3 Protein homeostasis.proteolysis.serine-type peptidase activities.S1-class protease (Deg) 35
19.4.2.4 Protein homeostasis.proteolysis.serine-type peptidase activities.S16-class protease (LON) 20
19.4.2.5 Protein homeostasis.proteolysis.serine-type peptidase activities.S49-class plastidial protease (SppA) 26
19.4.2.6 Protein homeostasis.proteolysis.serine-type peptidase activities.S54-class protease (RBL)) 18
19.4.2.7 Protein homeostasis.proteolysis.serine-type peptidase activities.S28-class serine carboxypeptidase 133
19.4.2.8.2 Protein homeostasis.proteolysis.serine-type peptidase activities.mitochondrion Clp-type protease complex.chaperone component ClpX 22
19.4.2.9.1 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.proteolytic core component ClpP1/3-6 8
19.4.2.9.2 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.non-proteolytic core component ClpR 4
19.4.2.9.3 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.plant-specific stabilizing component ClpT 6
19.4.2.9.4 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.chaperone component ClpC 10
19.4.2.9.6 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.adaptor component ClpS 2
19.4.2.9.7 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.adaptor component ClpF 6
19.4.3.1 Protein homeostasis.proteolysis.aspartic-type peptidase activities.A1-class protease (Pepsin) 550
19.4.4.1 Protein homeostasis.proteolysis.threonine-type peptidase activities.T3-class gamma-glutamyl transpeptidase (GGT) 58
19.4.5 Protein homeostasis.proteolysis.metallopeptidase activities 4
19.4.5.1 Protein homeostasis.proteolysis.metallopeptidase activities.M3-class metalloprotease 3
19.4.5.2 Protein homeostasis.proteolysis.metallopeptidase activities.M8-class metalloprotease (Leishmanolysin) 8
19.4.5.3 Protein homeostasis.proteolysis.metallopeptidase activities.M10-class metalloprotease (Matrixin) 169
19.4.5.4.1 Protein homeostasis.proteolysis.metallopeptidase activities.M16 families.peptidase (PQQL-like) 10
19.4.5.4.2 Protein homeostasis.proteolysis.metallopeptidase activities.M16 families.peptidase (Nardilysin-like) 65
19.4.5.5.1 Protein homeostasis.proteolysis.metallopeptidase activities.M48 families.zinc metalloprotease (PGM48) 8
19.4.5.5.2 Protein homeostasis.proteolysis.metallopeptidase activities.M48 families.zinc metalloprotease (STE24) 14
19.4.5.5.3 Protein homeostasis.proteolysis.metallopeptidase activities.M48 families.zinc metalloprotease (OMA1) 45
19.4.5.6.1 Protein homeostasis.proteolysis.metallopeptidase activities.aminopeptidase activities.M24-class methionyl aminopeptidase (MAP1) 20
19.4.5.6.2 Protein homeostasis.proteolysis.metallopeptidase activities.aminopeptidase activities.M24-class methionyl aminopeptidase (MAP2) 14
19.4.5.6.3 Protein homeostasis.proteolysis.metallopeptidase activities.aminopeptidase activities.M17-class leucyl aminopeptidase (LAP) 33
19.4.5.6.4 Protein homeostasis.proteolysis.metallopeptidase activities.aminopeptidase activities.M18-class aspartyl aminopeptidase (DAP) 30
19.4.5.6.5 Protein homeostasis.proteolysis.metallopeptidase activities.aminopeptidase activities.M1-class neutral/aromatic-hydroxyl amino acid aminopeptidase 52
19.4.5.6.6 Protein homeostasis.proteolysis.metallopeptidase activities.aminopeptidase activities.M20-class IAA-amino acid hydrolase 70
19.4.5.7.1 Protein homeostasis.proteolysis.metallopeptidase activities.carboxypeptidase activities.M14-class carboxypeptidase 2
19.4.5.7.2 Protein homeostasis.proteolysis.metallopeptidase activities.carboxypeptidase activities.M14-class carboxypeptidase (SOL) 16
19.4.5.7.3 Protein homeostasis.proteolysis.metallopeptidase activities.carboxypeptidase activities.M28-class carboxypeptidase 36
19.4.5.8.1.1 Protein homeostasis.proteolysis.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.component FtsH4/11 10
19.4.5.8.1.2.1 Protein homeostasis.proteolysis.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH3/10 matrix-AAA protease heterodimers.component Fts3/10 16
19.4.5.8.2.1 Protein homeostasis.proteolysis.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.component FtsH1/2/5/6/8 2
19.4.5.8.2.2 Protein homeostasis.proteolysis.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.component FtsH7/9 2
19.4.6 Protein homeostasis.proteolysis.protease inhibitor activities 6
19.4.6.1 Protein homeostasis.proteolysis.protease inhibitor activities.Serpin protease inhibitor 191
19.4.6.2 Protein homeostasis.proteolysis.protease inhibitor activities.Kunitz protease inhibitor 251
19.4.6.3 Protein homeostasis.proteolysis.protease inhibitor activities.Bowman-Birk protease inhibitor 16
19.4.6.4 Protein homeostasis.proteolysis.protease inhibitor activities.PR6 protease inhibitor 144
19.4.6.5 Protein homeostasis.proteolysis.protease inhibitor activities.Cystatin protease inhibitor 94
19.5.1 Protein homeostasis.protein repair.protein-L-isoaspartate methyltransferase 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001