Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.proteolysis.protease inhibitor activities.PR6 protease inhibitor
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr4 | 1 | CH_acertr_21 | 5 | 5 | 0.0000000000000466913 |
| Actinidia chinensis | Lachesis_group18 | 1 | CH_ach_201 | 2 | 2 | 0.000325928 |
| Brassica oleracea | C4 | 1 | CH_bol_413 | 2 | 2 | 0.000686409 |
| Brassica rapa | A04 | 1 | CH_bra_324 | 2 | 2 | 0.000429314 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 1 | CH_bvu_24 | 5 | 5 | 0.0000000000000444107 |
| Capsicum annuum | PGAv.1.6.scaffold630 | 1 | CH_can_64 | 4 | 4 | 0.0000000000592037 |
| Coffea canephora | chr3 | 1 | CH_ccan_283 | 2 | 5 | 0.000255531 |
| Citrus clementina | scaffold_9 | 1 | CH_ccl_203 | 3 | 3 | 0.00000222069 |
| Citrus clementina | scaffold_9 | 1 | CH_ccl_204 | 3 | 3 | 0.00000222069 |
| Ceratophyllum demersum | 12 | 1 | CH_cde_30 | 3 | 4 | 0.000000149702 |
| Carya illinoinensis | Chr01 | 1 | CH_cil_220 | 3 | 3 | 0.00000011526 |
| Carya illinoinensis | Chr04 | 1 | CH_cil_221 | 3 | 3 | 0.00000011526 |
| Citrullus lanatus | CG_Chr07 | 1 | CH_cla_12 | 5 | 6 | 0.00000000000557888 |
| Citrullus lanatus | CG_Chr05 | 1 | CH_cla_33 | 4 | 6 | 0.0000000314266 |
| Cucumis melo | chr06 | 1 | CH_cme_4 | 10 | 15 | 2.43676e-26 |
| Cucumis melo | chr11 | 1 | CH_cme_62 | 4 | 4 | 0.00000000272572 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2008 | 1 | CH_cqu_207 | 3 | 3 | 0.000000963157 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3429 | 1 | CH_cqu_208 | 3 | 3 | 0.000000963157 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1762 | 1 | CH_cqu_98 | 4 | 5 | 0.00000000114074 |
| Capsella rubella | scaffold_4 | 1 | CH_cru_209 | 3 | 5 | 0.00000961852 |
| Capsella rubella | scaffold_8 | 1 | CH_cru_69 | 4 | 4 | 0.000000000246272 |
| Cucumis sativus L. | chr3 | 1 | CH_csa_32 | 6 | 11 | 0.000000000000210584 |
| Daucus carota | DCARv2_Chr3 | 1 | CH_dca_21 | 5 | 5 | 0.0000000000000312763 |
| Davidia involucrata | GWHABJS00000014 | 1 | CH_din_123 | 3 | 3 | 0.0000000750394 |
| Durio zibethinus | NW_019168492.1 | 1 | CH_dzi_126 | 3 | 7 | 0.00000112758 |
| Erythranthe guttata | scaffold_4 | 1 | CH_egut_228 | 3 | 3 | 0.0000077067 |
| Erythranthe guttata | scaffold_1 | 1 | CH_egut_55 | 5 | 5 | 0.00000000000245209 |
| Eutrema salsugineum | scaffold_16 | 1 | CH_esa_35 | 6 | 16 | 0.000000000000789909 |
| Fragaria x ananassa | Fvb4-2 | 1 | CH_fan_3 | 9 | 18 | 8.74399e-26 |
| Fragaria x ananassa | Fvb4-3 | 1 | CH_fan_6 | 7 | 13 | 2.7316e-19 |
| Fragaria vesca | Fvb4 | 1 | CH_fve_14 | 7 | 12 | 2.08583e-20 |
| Gossypium hirsutum | A05 | 1 | CH_ghi_275 | 3 | 3 | 0.000000235284 |
| Gossypium hirsutum | D11 | 1 | CH_ghi_276 | 3 | 3 | 0.000000235284 |
| Glycine max | Gm20 | 1 | CH_gma_162 | 3 | 3 | 0.000000121016 |
| Gossypium raimondii | Chr09 | 1 | CH_gra_154 | 3 | 3 | 0.000000362147 |
| Gossypium raimondii | Chr07 | 1 | CH_gra_73 | 4 | 4 | 0.000000000058248 |
| Helianthus annuus | HanXRQChr13 | 1 | CH_han_108 | 5 | 8 | 0.000000000019044 |
| Helianthus annuus | HanXRQChr01 | 1 | CH_han_40 | 6 | 7 | 7.36388e-16 |
| Helianthus annuus | HanXRQChr01 | 1 | CH_han_66 | 6 | 13 | 0.00000000000018023 |
| Hydrangea macrophylla | Hma1.2p1_0310F.1 | 1 | CH_hma_6 | 6 | 9 | 0.00000000000000268552 |
| Hydrangea macrophylla | Hma1.2p1_0650F.1 | 1 | CH_hma_80 | 3 | 4 | 0.0000062179 |
| Lupinus albus | Lalb_Chr02 | 1 | CH_lal_314 | 2 | 2 | 0.000314895 |
| Lupinus albus | Lalb_Chr21 | 1 | CH_lal_433 | 2 | 3 | 0.000944626 |
| Lotus japonicus | chr5 | 1 | CH_lja_115 | 3 | 3 | 0.0000000767031 |
| Magnolia biondii | Chr04 | 1 | CH_mbi_562 | 2 | 3 | 0.000437077 |
| Malus domestica | Chr13 | 1 | CH_mdo_48 | 5 | 6 | 0.0000000000000117253 |
| Manihot esculenta | Chromosome05 | 1 | CH_mes_8 | 15 | 23 | 1.52246e-42 |
| Medicago truncatula | chr1 | 1 | CH_mtr_449 | 3 | 7 | 0.0000106297 |
| Medicago truncatula | chr3 | 1 | CH_mtr_476 | 3 | 9 | 0.0000255047 |
| Nelumbo nucifera | chr3 | 1 | CH_nnu_442 | 2 | 2 | 0.000654022 |
| Olea europaea | chr5 | 1 | CH_oeu_22 | 5 | 16 | 0.000000000014881 |
| Petunia axillaris | Peaxi162Scf00714 | 1 | CH_pax_358 | 2 | 2 | 0.000703556 |
| Prunus persica | Pp08 | 1 | CH_ppe_290 | 3 | 6 | 0.0000200193 |
| Prunus persica | Pp01 | 1 | CH_ppe_58 | 6 | 10 | 0.00000000000000229129 |
| Populus trichocarpa | Chr06 | 1 | CH_ptr_182 | 4 | 8 | 0.000000196175 |
| Populus trichocarpa | Chr16 | 1 | CH_ptr_255 | 3 | 3 | 0.00000571303 |
| Populus trichocarpa | Chr10 | 1 | CH_ptr_49 | 6 | 6 | 5.62776e-16 |
| Quercus lobata | 6 | 1 | CH_qlo_166 | 4 | 4 | 0.000000000000412889 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 1 | CH_rch_29 | 8 | 19 | 1.71404e-22 |
| Salvia bowleyana | GWHASIU00000002 | 1 | CH_sbo_2 | 13 | 20 | 9.28586e-42 |
| Salix brachista | GWHAAZH00000010 | 1 | CH_sbr_11 | 8 | 8 | 2.76072e-21 |
| Salix brachista | GWHAAZH00000016 | 1 | CH_sbr_6 | 14 | 39 | 7.89027e-31 |
| Sechium edule | LG05 | 1 | CH_sed_133 | 3 | 3 | 0.00000347383 |
| Solanum lycopersicum | SL4.0ch09 | 1 | CH_sly_2 | 12 | 13 | 5.36618e-37 |
| Schrenkiella parvula | ch2-4 | 1 | CH_spa_300 | 2 | 2 | 0.00078734 |
| Solanum pennellii | Spenn-ch09 | 1 | CH_spe_49 | 5 | 7 | 0.000000000000793214 |
| Trochodendron aralioides | group14 | 1 | CH_tar_202 | 3 | 9 | 0.00000907803 |
| Theobroma cacao | Chromosome_10 | 1 | CH_tca_18 | 7 | 9 | 3.46566e-19 |
| Tarenaya hassleriana | NW_010966881.1 | 1 | CH_tha_185 | 2 | 2 | 0.000419082 |
| Vanilla planifolia | CM028158.1 | 1 | CH_vpl_330 | 2 | 2 | 0.000443328 |
| Vitis vinifera | chr5 | 1 | CH_vvi_87 | 4 | 5 | 0.0000000000990169 |
| Zea mays | 6 | 1 | CH_zma_113 | 3 | 4 | 0.00000448546 |
| Zea mays | 5 | 1 | CH_zma_29 | 5 | 9 | 0.00000000000830774 |
| Acer truncatum | chr4 | 2 | CH_acertr_21 | 5 | 5 | 0.0000000000000466913 |
| Actinidia chinensis | Lachesis_group18 | 2 | CH_ach_201 | 2 | 2 | 0.000325928 |
| Brassica oleracea | C4 | 2 | CH_bol_413 | 2 | 2 | 0.000686409 |
| Brassica rapa | A04 | 2 | CH_bra_324 | 2 | 2 | 0.000429314 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 2 | CH_bvu_24 | 5 | 5 | 0.0000000000000444107 |
| Capsicum annuum | PGAv.1.6.scaffold630 | 2 | CH_can_64 | 4 | 4 | 0.0000000000592037 |
| Coffea canephora | chr3 | 2 | CH_ccan_283 | 2 | 5 | 0.000255531 |
| Citrus clementina | scaffold_9 | 2 | CH_ccl_203 | 3 | 3 | 0.00000222069 |
| Citrus clementina | scaffold_9 | 2 | CH_ccl_204 | 3 | 3 | 0.00000222069 |
| Ceratophyllum demersum | 12 | 2 | CH_cde_30 | 3 | 4 | 0.000000149702 |
| Carya illinoinensis | Chr01 | 2 | CH_cil_220 | 3 | 3 | 0.00000011526 |
| Carya illinoinensis | Chr04 | 2 | CH_cil_221 | 3 | 3 | 0.00000011526 |
| Citrullus lanatus | CG_Chr07 | 2 | CH_cla_12 | 5 | 6 | 0.00000000000557888 |
| Citrullus lanatus | CG_Chr05 | 2 | CH_cla_33 | 4 | 6 | 0.0000000314266 |
| Cucumis melo | chr06 | 2 | CH_cme_4 | 10 | 15 | 2.43676e-26 |
| Cucumis melo | chr11 | 2 | CH_cme_62 | 4 | 4 | 0.00000000272572 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2008 | 2 | CH_cqu_207 | 3 | 3 | 0.000000963157 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3429 | 2 | CH_cqu_208 | 3 | 3 | 0.000000963157 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1762 | 2 | CH_cqu_98 | 4 | 5 | 0.00000000114074 |
| Capsella rubella | scaffold_4 | 2 | CH_cru_209 | 3 | 5 | 0.00000961852 |
| Capsella rubella | scaffold_8 | 2 | CH_cru_69 | 4 | 4 | 0.000000000246272 |
| Cucumis sativus L. | chr3 | 2 | CH_csa_32 | 6 | 11 | 0.000000000000210584 |
| Daucus carota | DCARv2_Chr3 | 2 | CH_dca_21 | 5 | 5 | 0.0000000000000312763 |
| Davidia involucrata | GWHABJS00000014 | 2 | CH_din_123 | 3 | 3 | 0.0000000750394 |
| Durio zibethinus | NW_019168492.1 | 2 | CH_dzi_126 | 3 | 7 | 0.00000112758 |
| Erythranthe guttata | scaffold_4 | 2 | CH_egut_228 | 3 | 3 | 0.0000077067 |
| Erythranthe guttata | scaffold_1 | 2 | CH_egut_55 | 5 | 5 | 0.00000000000245209 |
| Eutrema salsugineum | scaffold_16 | 2 | CH_esa_35 | 6 | 16 | 0.000000000000789909 |
| Fragaria x ananassa | Fvb4-2 | 2 | CH_fan_3 | 9 | 18 | 8.74399e-26 |
| Fragaria x ananassa | Fvb4-3 | 2 | CH_fan_6 | 7 | 13 | 2.7316e-19 |
| Fragaria vesca | Fvb4 | 2 | CH_fve_14 | 7 | 12 | 2.08583e-20 |
| Gossypium hirsutum | A05 | 2 | CH_ghi_275 | 3 | 3 | 0.000000235284 |
| Gossypium hirsutum | D11 | 2 | CH_ghi_276 | 3 | 3 | 0.000000235284 |
| Glycine max | Gm20 | 2 | CH_gma_162 | 3 | 3 | 0.000000121016 |
| Gossypium raimondii | Chr09 | 2 | CH_gra_154 | 3 | 3 | 0.000000362147 |
| Gossypium raimondii | Chr07 | 2 | CH_gra_73 | 4 | 4 | 0.000000000058248 |
| Helianthus annuus | HanXRQChr13 | 2 | CH_han_108 | 5 | 8 | 0.000000000019044 |
| Helianthus annuus | HanXRQChr01 | 2 | CH_han_40 | 6 | 7 | 7.36388e-16 |
| Helianthus annuus | HanXRQChr01 | 2 | CH_han_66 | 6 | 13 | 0.00000000000018023 |
| Hydrangea macrophylla | Hma1.2p1_0310F.1 | 2 | CH_hma_6 | 6 | 9 | 0.00000000000000268552 |
| Hydrangea macrophylla | Hma1.2p1_0650F.1 | 2 | CH_hma_80 | 3 | 4 | 0.0000062179 |
| Lupinus albus | Lalb_Chr02 | 2 | CH_lal_314 | 2 | 2 | 0.000314895 |
| Lupinus albus | Lalb_Chr21 | 2 | CH_lal_433 | 2 | 3 | 0.000944626 |
| Lotus japonicus | chr5 | 2 | CH_lja_115 | 3 | 3 | 0.0000000767031 |
| Magnolia biondii | Chr04 | 2 | CH_mbi_562 | 2 | 3 | 0.000437077 |
| Malus domestica | Chr13 | 2 | CH_mdo_48 | 5 | 6 | 0.0000000000000117253 |
| Manihot esculenta | Chromosome05 | 2 | CH_mes_8 | 15 | 23 | 1.52246e-42 |
| Nelumbo nucifera | chr3 | 2 | CH_nnu_442 | 2 | 2 | 0.000654022 |
| Olea europaea | chr5 | 2 | CH_oeu_22 | 5 | 16 | 0.000000000014881 |
| Petunia axillaris | Peaxi162Scf00714 | 2 | CH_pax_358 | 2 | 2 | 0.000703556 |
| Prunus persica | Pp08 | 2 | CH_ppe_290 | 3 | 6 | 0.0000200193 |
| Prunus persica | Pp01 | 2 | CH_ppe_58 | 6 | 10 | 0.00000000000000229129 |
| Populus trichocarpa | Chr06 | 2 | CH_ptr_182 | 4 | 8 | 0.000000196175 |
| Populus trichocarpa | Chr16 | 2 | CH_ptr_255 | 3 | 3 | 0.00000571303 |
| Populus trichocarpa | Chr10 | 2 | CH_ptr_49 | 6 | 6 | 5.62776e-16 |
| Quercus lobata | 6 | 2 | CH_qlo_166 | 4 | 4 | 0.000000000000412889 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 2 | CH_rch_29 | 8 | 19 | 1.71404e-22 |
| Salvia bowleyana | GWHASIU00000002 | 2 | CH_sbo_2 | 13 | 20 | 9.28586e-42 |
| Salix brachista | GWHAAZH00000010 | 2 | CH_sbr_11 | 8 | 8 | 2.76072e-21 |
| Salix brachista | GWHAAZH00000016 | 2 | CH_sbr_6 | 14 | 39 | 7.89027e-31 |
| Sechium edule | LG05 | 2 | CH_sed_133 | 3 | 3 | 0.00000347383 |
| Solanum lycopersicum | SL4.0ch09 | 2 | CH_sly_2 | 12 | 13 | 5.36618e-37 |
| Schrenkiella parvula | ch2-4 | 2 | CH_spa_300 | 2 | 2 | 0.00078734 |
| Solanum pennellii | Spenn-ch09 | 2 | CH_spe_49 | 5 | 7 | 0.000000000000793214 |
| Trochodendron aralioides | group14 | 2 | CH_tar_202 | 3 | 9 | 0.00000907803 |
| Theobroma cacao | Chromosome_10 | 2 | CH_tca_18 | 7 | 9 | 3.46566e-19 |
| Tarenaya hassleriana | NW_010966881.1 | 2 | CH_tha_185 | 2 | 2 | 0.000419082 |
| Vanilla planifolia | CM028158.1 | 2 | CH_vpl_330 | 2 | 2 | 0.000443328 |
| Vitis vinifera | chr5 | 2 | CH_vvi_87 | 4 | 5 | 0.0000000000990169 |
| Zea mays | 6 | 2 | CH_zma_113 | 3 | 4 | 0.00000448546 |
| Zea mays | 5 | 2 | CH_zma_29 | 5 | 9 | 0.00000000000830774 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |