Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (PUX7/8/9/13)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Erigeron canadensis | Conyza_canadensis_scaffold:1 | 1 | CH_eca_451 | 2 | 2 | 0.000448722 |
Papaver somniferum | NC_039363.1 | 1 | CH_pso_238 | 4 | 16 | 0.0000000850472 |
Papaver somniferum | NC_039358.1 | 1 | CH_pso_74 | 5 | 7 | 0.000000000000121703 |
Quercus lobata | 3 | 1 | CH_qlo_965 | 2 | 2 | 0.000516289 |
Rhododendron simsii | chr11 | 1 | CH_rsi_487 | 2 | 2 | 0.000387184 |
Schrenkiella parvula | ch7-4 | 1 | CH_spa_194 | 3 | 17 | 0.000126239 |
Selenicereus undatus | Scaffold_10417 | 1 | CH_sun_119 | 2 | 2 | 0.0000726639 |
Trochodendron aralioides | group12 | 1 | CH_tar_573 | 3 | 28 | 0.000988371 |
Erigeron canadensis | Conyza_canadensis_scaffold:1 | 2 | CH_eca_451 | 2 | 2 | 0.000448722 |
Papaver somniferum | NC_039363.1 | 2 | CH_pso_238 | 4 | 16 | 0.0000000850472 |
Papaver somniferum | NC_039358.1 | 2 | CH_pso_74 | 5 | 7 | 0.000000000000121703 |
Quercus lobata | 3 | 2 | CH_qlo_965 | 2 | 2 | 0.000516289 |
Rhododendron simsii | chr11 | 2 | CH_rsi_487 | 2 | 2 | 0.000387184 |
Schrenkiella parvula | ch7-4 | 2 | CH_spa_194 | 3 | 17 | 0.000126239 |
Selenicereus undatus | Scaffold_10417 | 2 | CH_sun_119 | 2 | 2 | 0.0000726639 |
Trochodendron aralioides | group12 | 2 | CH_tar_573 | 3 | 28 | 0.000988371 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |