Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN11

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cicer arietinum L. Ca_LG1_v3 1 CH_car_203 2 3 0.000233481
Corylus avellana 4 1 CH_cav_234 2 2 0.0000766695
Cucumis melo chr07 1 CH_cme_170 2 2 0.0000667111
Erigeron canadensis Conyza_canadensis_scaffold:7 1 CH_eca_254 2 2 0.0000448722
Olea europaea chr18 1 CH_oeu_292 2 2 0.000320273
Papaver somniferum NC_039364.1 1 CH_pso_471 2 2 0.00013514
Papaver somniferum NC_039365.1 1 CH_pso_472 2 2 0.00013514
Sequoiadendron giganteum chr9 1 CH_sgi_1207 2 2 0.000292291
Sequoiadendron giganteum chr3 1 CH_sgi_1208 2 2 0.000292291
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_309 2 2 0.000278772
Cicer arietinum L. Ca_LG1_v3 2 CH_car_203 2 3 0.000233481
Corylus avellana 4 2 CH_cav_234 2 2 0.0000766695
Cucumis melo chr07 2 CH_cme_170 2 2 0.0000667111
Erigeron canadensis Conyza_canadensis_scaffold:7 2 CH_eca_254 2 2 0.0000448722
Eucalyptus grandis Chr07 2 CH_egr_861 3 38 0.000432362
Olea europaea chr18 2 CH_oeu_292 2 2 0.000320273
Papaver somniferum NC_039364.1 2 CH_pso_471 2 2 0.00013514
Papaver somniferum NC_039365.1 2 CH_pso_472 2 2 0.00013514
Sequoiadendron giganteum chr9 2 CH_sgi_1207 2 2 0.000292291
Sequoiadendron giganteum chr3 2 CH_sgi_1208 2 2 0.000292291
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_309 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001