Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UCH deubiquitinase activities.deubiquitinase (UCH3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 1 CH_aly_219 2 2 0.0000660044
Citrus clementina scaffold_3 1 CH_ccl_180 3 9 0.000000847693
Capsella rubella scaffold_7 1 CH_cru_248 2 2 0.0000731154
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_211 2 2 0.0000929238
Vigna mungo CM024069.1 1 CH_vmu_276 2 2 0.000193842
Arabidopsis lyrata scaffold_7 2 CH_aly_219 2 2 0.0000660044
Citrus clementina scaffold_3 2 CH_ccl_180 3 9 0.000000847693
Capsella rubella scaffold_7 2 CH_cru_248 2 2 0.0000731154
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_211 2 2 0.0000929238
Vigna mungo CM024069.1 2 CH_vmu_276 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001