Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP26)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carica papaya supercontig_42 1 CH_cpa_168 2 2 0.0000950661
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_752 2 6 0.000597931
Solanum tuberosum ST4.03ch03 1 CH_stu_361 2 2 0.0000512453
Vanilla planifolia CM028161.1 1 CH_vpl_152 2 2 0.000073888
Carica papaya supercontig_42 2 CH_cpa_168 2 2 0.0000950661
Eucalyptus grandis Chr05 2 CH_egr_663 2 2 0.0000585274
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_752 2 6 0.000597931
Solanum tuberosum ST4.03ch03 2 CH_stu_361 2 2 0.0000512453
Vanilla planifolia CM028161.1 2 CH_vpl_152 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001