Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.UDP-glucose glycoprotein glucosyltransferase (UGGT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB03 1 CH_bca_757 2 3 0.000192384
Capsicum annuum PGAv.1.6.scaffold798 1 CH_can_267 2 2 0.0000826105
Coffea canephora chr2 1 CH_ccan_174 2 9 0.0000255533
Citrullus lanatus CG_Chr05 1 CH_cla_154 2 3 0.000266123
Gossypium hirsutum D12 1 CH_ghi_200 3 3 0.0000000213895
Gossypium raimondii Chr08 1 CH_gra_297 2 2 0.000160832
Hydrangea macrophylla Hma1.2p1_0217F.1 1 CH_hma_207 2 2 0.000111086
Lonicera japonica GWHAAZE00000005 1 CH_lonja_370 2 2 0.0000598874
Pisum sativum chr1LG6 1 CH_psa_279 2 2 0.00015649
Sapria himalayana scaffold18_10761044 1 CH_shi_94 2 2 0.0000571804
Brassica carinata ChrB03 2 CH_bca_757 2 3 0.000192384
Capsicum annuum PGAv.1.6.scaffold798 2 CH_can_267 2 2 0.0000826105
Coffea canephora chr2 2 CH_ccan_174 2 9 0.0000255533
Citrullus lanatus CG_Chr05 2 CH_cla_154 2 3 0.000266123
Gossypium hirsutum D12 2 CH_ghi_200 3 3 0.0000000213895
Gossypium raimondii Chr08 2 CH_gra_297 2 2 0.000160832
Hydrangea macrophylla Hma1.2p1_0217F.1 2 CH_hma_207 2 2 0.000111086
Lonicera japonica GWHAAZE00000005 2 CH_lonja_370 2 2 0.0000598874
Pisum sativum chr1LG6 2 CH_psa_279 2 2 0.00015649
Sapria himalayana scaffold18_10761044 2 CH_shi_94 2 2 0.0000571804

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001