Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.associated plant-specific component PAWH

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group20 1 CH_ach_226 2 2 0.000543213
Brassica carinata ChrC06 1 CH_bca_1127 2 3 0.000961902
Chara braunii BFEA01000092 1 CH_cbr_15 3 3 0.0000000077605
Chlamydomonas reinhardtii chromosome_2 1 CH_cre_10 3 3 0.000000019404
Magnolia biondii Chr09 1 CH_mbi_194 3 7 0.000000495247
Actinidia chinensis Lachesis_group20 2 CH_ach_226 2 2 0.000543213
Brassica carinata ChrC06 2 CH_bca_1127 2 3 0.000961902
Chara braunii BFEA01000092 2 CH_cbr_15 3 3 0.0000000077605
Chlamydomonas reinhardtii chromosome_2 2 CH_cre_10 3 3 0.000000019404
Magnolia biondii Chr09 2 CH_mbi_194 3 7 0.000000495247

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001