Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (BPM)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr3_EL10_PGA_scaffold7 1 CH_bvu_260 2 2 0.00049675
Carya illinoinensis Chr07 1 CH_cil_551 2 2 0.000929742
Chenopodium quinoa C_Quinoa_Scaffold_1447 1 CH_cqu_602 2 2 0.000995025
Glycine max Gm19 1 CH_gma_160 4 12 0.00000011068
Marchantia polymorpha scaffold_51 1 CH_mpo_115 2 4 0.000662581
Physcomitrium patens Chr17 1 CH_ppa_199 2 2 0.000367636
Papaver somniferum NC_039360.1 1 CH_pso_637 3 20 0.000484795
Phaseolus vulgaris Chr01 1 CH_pvu_106 4 10 0.00000000873994
Salvia bowleyana GWHASIU00000002 1 CH_sbo_271 2 2 0.000045498
Vigna mungo CM024070.1 1 CH_vmu_33 4 4 0.0000000000283278
Beta vulgaris Chr3_EL10_PGA_scaffold7 2 CH_bvu_260 2 2 0.00049675
Carya illinoinensis Chr07 2 CH_cil_551 2 2 0.000929742
Chenopodium quinoa C_Quinoa_Scaffold_1447 2 CH_cqu_602 2 2 0.000995025
Eucalyptus grandis Chr07 2 CH_egr_893 2 2 0.000585274
Glycine max Gm19 2 CH_gma_160 4 12 0.00000011068
Marchantia polymorpha scaffold_51 2 CH_mpo_115 2 4 0.000662581
Physcomitrium patens Chr17 2 CH_ppa_199 2 2 0.000367636
Papaver somniferum NC_039360.1 2 CH_pso_637 3 20 0.000484795
Phaseolus vulgaris Chr01 2 CH_pvu_106 4 10 0.00000000873994
Salvia bowleyana GWHASIU00000002 2 CH_sbo_271 2 2 0.000045498
Vigna mungo CM024070.1 2 CH_vmu_33 4 4 0.0000000000283278

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001