Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.CNX-CRT cycle.lectin chaperone (CNX)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carya illinoinensis Chr05 1 CH_cil_189 3 4 0.0000000230512
Nelumbo nucifera chr4 1 CH_nnu_349 2 4 0.000261597
Punica granatum NC_045129.1 1 CH_pgr_269 2 2 0.000225107
Physcomitrium patens Chr13 1 CH_ppa_279 2 2 0.000612726
Physcomitrium patens Chr03 1 CH_ppa_280 2 2 0.000612726
Phaseolus vulgaris Chr02 1 CH_pvu_261 2 2 0.0000734727
Sechium edule LG08 1 CH_sed_190 2 2 0.0000713419
Carya illinoinensis Chr05 2 CH_cil_189 3 4 0.0000000230512
Nelumbo nucifera chr4 2 CH_nnu_349 2 4 0.000261597
Punica granatum NC_045129.1 2 CH_pgr_269 2 2 0.000225107
Physcomitrium patens Chr13 2 CH_ppa_279 2 2 0.000612726
Physcomitrium patens Chr03 2 CH_ppa_280 2 2 0.000612726
Phaseolus vulgaris Chr02 2 CH_pvu_261 2 2 0.0000734727
Sechium edule LG08 2 CH_sed_190 2 2 0.0000713419

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001