Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP5/8-11)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group6 1 CH_ach_259 2 2 0.000814819
Camellia sinensis var. sinensis Chr13 1 CH_camsi_971 2 2 0.000962949
Pisum sativum chr3LG5 1 CH_psa_394 2 2 0.000782452
Simmondsia chinensis GWHAASQ00000007 1 CH_sci_296 2 2 0.000851426
Sequoiadendron giganteum chr2 1 CH_sgi_1066 2 2 0.000146145
Utricularia gibba unitig_8 1 CH_ugi_283 2 2 0.000734592
Actinidia chinensis Lachesis_group6 2 CH_ach_259 2 2 0.000814819
Camellia sinensis var. sinensis Chr13 2 CH_camsi_971 2 2 0.000962949
Pisum sativum chr3LG5 2 CH_psa_394 2 2 0.000782452
Simmondsia chinensis GWHAASQ00000007 2 CH_sci_296 2 2 0.000851426
Sequoiadendron giganteum chr2 2 CH_sgi_1066 2 2 0.000146145
Utricularia gibba unitig_8 2 CH_ugi_283 2 2 0.000734592

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001