Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.protein quality control.ribosome-associated chaperone activities.NAC chaperone heterodimer.subunit beta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_3895_HRSCAF_3912 1 CH_ama_116 2 2 0.000517331
Avicennia marina ScioBoG_102835_HRSCAF_103059 1 CH_ama_117 2 2 0.000517331
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 1 CH_amhyb_132 2 2 0.0000841751
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 1 CH_arhy_499 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_500 2 2 0.00017963
Daucus carota DCARv2_Chr4 1 CH_dca_356 2 2 0.000382665
Glycine max Gm11 1 CH_gma_434 2 2 0.000227734
Lupinus albus Lalb_Chr01 1 CH_lal_430 2 3 0.000944626
Lonicera japonica GWHAAZE00000004 1 CH_lonja_154 3 3 0.00000000537991
Lactuca sativa Lsat_1_v8_lg_5 1 CH_lsa_162 3 3 0.0000000396314
Manihot esculenta Chromosome09 1 CH_mes_74 4 4 0.00000000000341561
Medicago truncatula chr3 1 CH_mtr_145 4 7 0.0000000000364108
Olea europaea chr1 1 CH_oeu_90 3 4 0.000000957271
Pisum sativum chr7LG7 1 CH_psa_280 2 2 0.00015649
Papaver somniferum NC_039364.1 1 CH_pso_573 2 2 0.000337849
Papaver somniferum NC_039365.1 1 CH_pso_574 2 2 0.000337849
Quercus lobata CM012294 1 CH_qlo_123 7 51 0.00000000000000629184
Trochodendron aralioides group8 1 CH_tar_512 2 2 0.000600366
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_233 2 2 0.0000929238
Avicennia marina ScioBoG_3895_HRSCAF_3912 2 CH_ama_116 2 2 0.000517331
Avicennia marina ScioBoG_102835_HRSCAF_103059 2 CH_ama_117 2 2 0.000517331
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 2 CH_amhyb_132 2 2 0.0000841751
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 2 CH_arhy_499 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_500 2 2 0.00017963
Daucus carota DCARv2_Chr4 2 CH_dca_356 2 2 0.000382665
Glycine max Gm11 2 CH_gma_434 2 2 0.000227734
Lupinus albus Lalb_Chr01 2 CH_lal_430 2 3 0.000944626
Lonicera japonica GWHAAZE00000004 2 CH_lonja_154 3 3 0.00000000537991
Lactuca sativa Lsat_1_v8_lg_5 2 CH_lsa_162 3 3 0.0000000396314
Manihot esculenta Chromosome09 2 CH_mes_74 4 4 0.00000000000341561
Olea europaea chr1 2 CH_oeu_90 3 4 0.000000957271
Pisum sativum chr7LG7 2 CH_psa_280 2 2 0.00015649
Papaver somniferum NC_039364.1 2 CH_pso_573 2 2 0.000337849
Papaver somniferum NC_039365.1 2 CH_pso_574 2 2 0.000337849
Quercus lobata CM012294 2 CH_qlo_123 7 51 0.00000000000000629184
Trochodendron aralioides group8 2 CH_tar_512 2 2 0.000600366
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_233 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001