Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT4

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-9 1 CH_aar_143 2 2 0.0000912326
Chenopodium quinoa C_Quinoa_Scaffold_3333 1 CH_cqu_527 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3670 1 CH_cqu_528 2 2 0.000710732
Cucumis sativus L. chr2 1 CH_csa_195 2 2 0.0000834759
Fragaria x ananassa Fvb2-4 1 CH_fan_461 2 2 0.000277554
Fragaria x ananassa Fvb2-3 1 CH_fan_462 2 2 0.000277554
Fragaria vesca Fvb2 1 CH_fve_257 2 2 0.0000589102
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_467 2 2 0.0000398653
Aethionema arabicum LG-9 2 CH_aar_143 2 2 0.0000912326
Chenopodium quinoa C_Quinoa_Scaffold_3333 2 CH_cqu_527 2 2 0.000710732
Chenopodium quinoa C_Quinoa_Scaffold_3670 2 CH_cqu_528 2 2 0.000710732
Cucumis sativus L. chr2 2 CH_csa_195 2 2 0.0000834759
Fragaria x ananassa Fvb2-4 2 CH_fan_461 2 2 0.000277554
Fragaria x ananassa Fvb2-3 2 CH_fan_462 2 2 0.000277554
Fragaria vesca Fvb2 2 CH_fve_257 2 2 0.0000589102
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_467 2 2 0.0000398653

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001