Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.N-terminal modification.cysteine oxidase (PCO)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB01 1 CH_bca_291 3 3 0.000000311873
Camellia sinensis var. sinensis Chr7 1 CH_camsi_389 3 5 0.00000264874
Ceratophyllum demersum 12 1 CH_cde_127 3 7 0.0000935382
Magnolia biondii Chr14 1 CH_mbi_305 3 10 0.0000356305
Rhododendron simsii chr04 1 CH_rsi_576 2 2 0.000967961
Sequoiadendron giganteum chr8 1 CH_sgi_625 3 4 0.00000234909
Sapria himalayana scaffold32_6892495 1 CH_shi_202 2 2 0.000343083
Brassica carinata ChrB01 2 CH_bca_291 3 3 0.000000311873
Camellia sinensis var. sinensis Chr7 2 CH_camsi_389 3 5 0.00000264874
Ceratophyllum demersum 12 2 CH_cde_127 3 7 0.0000935382
Magnolia biondii Chr14 2 CH_mbi_305 3 10 0.0000356305
Rhododendron simsii chr04 2 CH_rsi_576 2 2 0.000967961
Sequoiadendron giganteum chr8 2 CH_sgi_625 3 4 0.00000234909
Sapria himalayana scaffold32_6892495 2 CH_shi_202 2 2 0.000343083

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001