Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substate adaptor (BT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group13 1 CH_ach_221 2 2 0.000543213
Capsicum annuum PGAv.1.6.scaffold993 1 CH_can_441 2 2 0.000826105
Papaver somniferum NW_020641039.1 1 CH_pso_247 3 3 0.000000125558
Solanum lycopersicum SL4.0ch06 1 CH_sly_540 2 2 0.000880411
Solanum pennellii Spenn-ch06 1 CH_spe_473 2 2 0.00044479
Solanum tuberosum ST4.03ch06 1 CH_stu_598 2 2 0.000768679
Actinidia chinensis Lachesis_group13 2 CH_ach_221 2 2 0.000543213
Capsicum annuum PGAv.1.6.scaffold993 2 CH_can_441 2 2 0.000826105
Eucalyptus grandis Chr01 2 CH_egr_812 3 28 0.000299908
Papaver somniferum NW_020641039.1 2 CH_pso_247 3 3 0.000000125558
Solanum lycopersicum SL4.0ch06 2 CH_sly_540 2 2 0.000880411
Solanum pennellii Spenn-ch06 2 CH_spe_473 2 2 0.00044479
Solanum tuberosum ST4.03ch06 2 CH_stu_598 2 2 0.000768679

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001