Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT6

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 1 CH_aly_221 2 2 0.0000660044
Arabidopsis thaliana Chr5 1 CH_ath_255 2 3 0.0000859463
Cardamine hirsuta Chr6 1 CH_chi_279 2 3 0.000207354
Eutrema salsugineum scaffold_2 1 CH_esa_160 2 2 0.0000761499
Solanum lycopersicum SL4.0ch05 1 CH_sly_387 2 3 0.000176077
Solanum pennellii Spenn-ch05 1 CH_spe_559 2 7 0.000933956
Arabidopsis lyrata scaffold_6 2 CH_aly_221 2 2 0.0000660044
Arabidopsis thaliana Chr5 2 CH_ath_255 2 3 0.0000859463
Cardamine hirsuta Chr6 2 CH_chi_279 2 3 0.000207354
Eutrema salsugineum scaffold_2 2 CH_esa_160 2 2 0.0000761499
Solanum lycopersicum SL4.0ch05 2 CH_sly_387 2 3 0.000176077
Solanum pennellii Spenn-ch05 2 CH_spe_559 2 7 0.000933956

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001