Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.proteolysis.metallopeptidase activities.M10-class metalloprotease (Matrixin)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr10 | 1 | CH_acertr_169 | 4 | 10 | 0.00000067375 |
| Acer truncatum | chr12 | 1 | CH_acertr_32 | 5 | 5 | 0.00000000000158751 |
| Actinidia chinensis | Lachesis_group3 | 1 | CH_ach_3 | 6 | 7 | 1.56464e-17 |
| Aquilegia oxysepala | CHR03 | 1 | CH_aox_26 | 5 | 9 | 0.0000000000309356 |
| Aquilegia oxysepala | CHR03 | 1 | CH_aox_36 | 4 | 4 | 0.000000000766097 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 1 | CH_arhy_185 | 4 | 12 | 0.00000000836269 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 1 | CH_bvu_83 | 3 | 3 | 0.0000000411285 |
| Corylus avellana | 9 | 1 | CH_cav_53 | 4 | 5 | 0.000000000473191 |
| Citrus clementina | scaffold_6 | 1 | CH_ccl_90 | 4 | 5 | 0.00000000104319 |
| Ceratophyllum demersum | 3 | 1 | CH_cde_20 | 4 | 6 | 0.0000000302416 |
| Carpinus fangiana | Cfa06 | 1 | CH_cfa_3 | 10 | 13 | 1.53538e-26 |
| Carpinus fangiana | Cfa01 | 1 | CH_cfa_83 | 4 | 5 | 0.0000000050517 |
| Carya illinoinensis | Chr02 | 1 | CH_cil_21 | 8 | 8 | 7.12921e-24 |
| Citrullus lanatus | CG_Chr09 | 1 | CH_cla_71 | 3 | 3 | 0.00000141661 |
| Cucumis melo | chr09 | 1 | CH_cme_1 | 12 | 19 | 8.49755e-33 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4244 | 1 | CH_cqu_210 | 3 | 4 | 0.00000113139 |
| Cucumis sativus L. | chr5 | 1 | CH_csa_1 | 14 | 15 | 5.93041e-41 |
| Daucus carota | DCARv2_Chr2 | 1 | CH_dca_193 | 3 | 4 | 0.0000136628 |
| Daucus carota | DCARv2_Chr9 | 1 | CH_dca_80 | 4 | 5 | 0.00000000708045 |
| Davidia involucrata | GWHABJS00000012 | 1 | CH_din_48 | 4 | 4 | 0.000000000078815 |
| Durio zibethinus | NW_019168470.1 | 1 | CH_dzi_146 | 3 | 4 | 0.0000028352 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 1 | CH_eca_27 | 6 | 11 | 0.00000000000000324329 |
| Eucalyptus grandis | Chr11 | 1 | CH_egr_184 | 5 | 6 | 0.0000000000000665338 |
| Erythranthe guttata | scaffold_4 | 1 | CH_egut_136 | 4 | 4 | 0.0000000237164 |
| Erythranthe guttata | scaffold_12 | 1 | CH_egut_137 | 4 | 4 | 0.0000000237164 |
| Erythranthe guttata | scaffold_4 | 1 | CH_egut_183 | 4 | 6 | 0.000000355223 |
| Erythranthe guttata | scaffold_11 | 1 | CH_egut_67 | 5 | 5 | 0.0000000000207251 |
| Fragaria x ananassa | Fvb6-2 | 1 | CH_fan_224 | 3 | 3 | 0.00000230854 |
| Fragaria vesca | Fvb6 | 1 | CH_fve_84 | 4 | 5 | 0.00000000064394 |
| Gossypium hirsutum | D12 | 1 | CH_ghi_322 | 3 | 3 | 0.00000103632 |
| Glycine max | Gm19 | 1 | CH_gma_111 | 4 | 4 | 0.00000000335893 |
| Glycine max | Gm01 | 1 | CH_gma_112 | 4 | 4 | 0.00000000335893 |
| Glycine max | Gm02 | 1 | CH_gma_7 | 12 | 16 | 3.04961e-33 |
| Gossypium raimondii | Chr08 | 1 | CH_gra_171 | 3 | 3 | 0.00000071136 |
| Helianthus annuus | HanXRQChr13 | 1 | CH_han_241 | 5 | 30 | 0.000000155394 |
| Helianthus annuus | HanXRQChr09 | 1 | CH_han_269 | 5 | 37 | 0.00000047413 |
| Hydrangea macrophylla | Hma1.2p1_0112F.1 | 1 | CH_hma_15 | 6 | 20 | 0.0000000000251921 |
| Lotus japonicus | chr2 | 1 | CH_lja_5 | 9 | 9 | 2.13405e-28 |
| Lonicera japonica | GWHAAZE00000003 | 1 | CH_lonja_316 | 4 | 29 | 0.0000207393 |
| Lonicera japonica | GWHAAZE00000094 | 1 | CH_lonja_46 | 6 | 6 | 8.67749e-17 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 1 | CH_lsa_184 | 5 | 50 | 0.000000141518 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 1 | CH_lsa_262 | 3 | 4 | 0.00000453285 |
| Malus domestica | Chr09 | 1 | CH_mdo_245 | 3 | 3 | 0.00000061692 |
| Manihot esculenta | Chromosome07 | 1 | CH_mes_133 | 4 | 4 | 0.00000000408848 |
| Manihot esculenta | Chromosome17 | 1 | CH_mes_54 | 6 | 8 | 0.0000000000000290076 |
| Manihot esculenta | Chromosome15 | 1 | CH_mes_64 | 6 | 12 | 0.000000000000955632 |
| Medicago truncatula | chr5 | 1 | CH_mtr_14 | 11 | 23 | 3.1544e-30 |
| Nelumbo nucifera | chr3 | 1 | CH_nnu_43 | 4 | 4 | 0.0000000000313346 |
| Nicotiana tabacum | Nitab4.5_0000034 | 1 | CH_nta_146 | 2 | 2 | 0.000329182 |
| Oryza sativa ssp. japonica | chr10 | 1 | CH_osa_91 | 3 | 3 | 0.0000000418381 |
| Petunia axillaris | Peaxi162Scf00174 | 1 | CH_pax_312 | 2 | 2 | 0.000422134 |
| Prunus persica | Pp03 | 1 | CH_ppe_14 | 9 | 9 | 3.30748e-26 |
| Prunus persica | Pp02 | 1 | CH_ppe_295 | 3 | 4 | 0.0000226947 |
| Pisum sativum | chr2LG1 | 1 | CH_psa_86 | 4 | 13 | 0.0000000212927 |
| Papaver somniferum | NW_020620381.1 | 1 | CH_pso_411 | 3 | 4 | 0.0000431761 |
| Papaver somniferum | NW_020624377.1 | 1 | CH_pso_712 | 3 | 9 | 0.000905039 |
| Populus trichocarpa | Chr19 | 1 | CH_ptr_236 | 3 | 3 | 0.0000022802 |
| Populus trichocarpa | Chr08 | 1 | CH_ptr_74 | 5 | 6 | 0.00000000000150814 |
| Phaseolus vulgaris | Chr02 | 1 | CH_pvu_77 | 4 | 4 | 0.00000000014994 |
| Quercus lobata | 6 | 1 | CH_qlo_28 | 10 | 13 | 3.41636e-27 |
| Quercus lobata | CM012294 | 1 | CH_qlo_429 | 4 | 8 | 0.000000211084 |
| Quercus lobata | 10 | 1 | CH_qlo_556 | 3 | 3 | 0.00000615756 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 1 | CH_rch_130 | 5 | 11 | 0.0000000000175047 |
| Rhododendron simsii | chr08 | 1 | CH_rsi_1 | 30 | 34 | 2.43098e-82 |
| Salvia bowleyana | GWHASIU00000004 | 1 | CH_sbo_36 | 6 | 7 | 0.00000000000000119013 |
| Salvia bowleyana | GWHASIU00000002 | 1 | CH_sbo_395 | 4 | 52 | 0.000365092 |
| Salix brachista | GWHAAZH00000019 | 1 | CH_sbr_144 | 3 | 3 | 0.00000131039 |
| Salix brachista | GWHAAZH00000008 | 1 | CH_sbr_68 | 4 | 4 | 0.000000000371602 |
| Sechium edule | LG03 | 1 | CH_sed_126 | 3 | 3 | 0.00000277906 |
| Sechium edule | LG11 | 1 | CH_sed_19 | 6 | 6 | 1.24916e-16 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_577 | 3 | 5 | 0.000000711854 |
| Solanum lycopersicum | SL4.0ch04 | 1 | CH_sly_559 | 2 | 2 | 0.000880411 |
| Solanum lycopersicum | SL4.0ch10 | 1 | CH_sly_560 | 2 | 2 | 0.000880411 |
| Solanum pennellii | Spenn-ch04 | 1 | CH_spe_440 | 2 | 2 | 0.000266874 |
| Solanum tuberosum | ST4.03ch05 | 1 | CH_stu_305 | 3 | 6 | 0.00000944958 |
| Solanum tuberosum | ST4.03ch00 | 1 | CH_stu_407 | 3 | 11 | 0.0000778966 |
| Selenicereus undatus | Scaffold_3410 | 1 | CH_sun_137 | 2 | 2 | 0.0000726639 |
| Trochodendron aralioides | group8 | 1 | CH_tar_1 | 9 | 10 | 2.73873e-26 |
| Trochodendron aralioides | group13 | 1 | CH_tar_190 | 3 | 3 | 0.00000302778 |
| Theobroma cacao | Chromosome_10 | 1 | CH_tca_98 | 4 | 4 | 0.00000000117984 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_227 | 1 | CH_tpr_135 | 3 | 4 | 0.00000120318 |
| Tripterygium wilfordii | NC_052242.1 | 1 | CH_twi_5 | 12 | 32 | 1.07243e-28 |
| Vigna mungo | CM024077.1 | 1 | CH_vmu_125 | 3 | 3 | 0.00000179112 |
| Vigna mungo | CM024074.1 | 1 | CH_vmu_67 | 5 | 28 | 0.0000000164446 |
| Vitis vinifera | chr14 | 1 | CH_vvi_52 | 5 | 5 | 0.0000000000000140618 |
| Acer truncatum | chr10 | 2 | CH_acertr_169 | 4 | 10 | 0.00000067375 |
| Acer truncatum | chr12 | 2 | CH_acertr_32 | 5 | 5 | 0.00000000000158751 |
| Actinidia chinensis | Lachesis_group3 | 2 | CH_ach_3 | 6 | 7 | 1.56464e-17 |
| Aquilegia oxysepala | CHR03 | 2 | CH_aox_26 | 5 | 9 | 0.0000000000309356 |
| Aquilegia oxysepala | CHR03 | 2 | CH_aox_36 | 4 | 4 | 0.000000000766097 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 2 | CH_arhy_185 | 4 | 12 | 0.00000000836269 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 2 | CH_bvu_83 | 3 | 3 | 0.0000000411285 |
| Corylus avellana | 9 | 2 | CH_cav_53 | 4 | 5 | 0.000000000473191 |
| Citrus clementina | scaffold_6 | 2 | CH_ccl_90 | 4 | 5 | 0.00000000104319 |
| Ceratophyllum demersum | 3 | 2 | CH_cde_20 | 4 | 6 | 0.0000000302416 |
| Carpinus fangiana | Cfa06 | 2 | CH_cfa_3 | 10 | 13 | 1.53538e-26 |
| Carpinus fangiana | Cfa01 | 2 | CH_cfa_83 | 4 | 5 | 0.0000000050517 |
| Carya illinoinensis | Chr02 | 2 | CH_cil_21 | 8 | 8 | 7.12921e-24 |
| Citrullus lanatus | CG_Chr09 | 2 | CH_cla_71 | 3 | 3 | 0.00000141661 |
| Cucumis melo | chr09 | 2 | CH_cme_1 | 12 | 19 | 8.49755e-33 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4244 | 2 | CH_cqu_210 | 3 | 4 | 0.00000113139 |
| Cucumis sativus L. | chr5 | 2 | CH_csa_1 | 14 | 15 | 5.93041e-41 |
| Daucus carota | DCARv2_Chr2 | 2 | CH_dca_193 | 3 | 4 | 0.0000136628 |
| Daucus carota | DCARv2_Chr9 | 2 | CH_dca_80 | 4 | 5 | 0.00000000708045 |
| Davidia involucrata | GWHABJS00000012 | 2 | CH_din_48 | 4 | 4 | 0.000000000078815 |
| Durio zibethinus | NW_019168470.1 | 2 | CH_dzi_146 | 3 | 4 | 0.0000028352 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 2 | CH_eca_27 | 6 | 11 | 0.00000000000000324329 |
| Eucalyptus grandis | Chr11 | 2 | CH_egr_184 | 5 | 6 | 0.0000000000000665338 |
| Erythranthe guttata | scaffold_4 | 2 | CH_egut_136 | 4 | 4 | 0.0000000237164 |
| Erythranthe guttata | scaffold_12 | 2 | CH_egut_137 | 4 | 4 | 0.0000000237164 |
| Erythranthe guttata | scaffold_4 | 2 | CH_egut_183 | 4 | 6 | 0.000000355223 |
| Erythranthe guttata | scaffold_11 | 2 | CH_egut_67 | 5 | 5 | 0.0000000000207251 |
| Fragaria x ananassa | Fvb6-2 | 2 | CH_fan_224 | 3 | 3 | 0.00000230854 |
| Fragaria vesca | Fvb6 | 2 | CH_fve_84 | 4 | 5 | 0.00000000064394 |
| Gossypium hirsutum | D12 | 2 | CH_ghi_322 | 3 | 3 | 0.00000103632 |
| Glycine max | Gm19 | 2 | CH_gma_111 | 4 | 4 | 0.00000000335893 |
| Glycine max | Gm01 | 2 | CH_gma_112 | 4 | 4 | 0.00000000335893 |
| Glycine max | Gm02 | 2 | CH_gma_7 | 12 | 16 | 3.04961e-33 |
| Gossypium raimondii | Chr08 | 2 | CH_gra_171 | 3 | 3 | 0.00000071136 |
| Helianthus annuus | HanXRQChr13 | 2 | CH_han_241 | 5 | 30 | 0.000000155394 |
| Helianthus annuus | HanXRQChr09 | 2 | CH_han_269 | 5 | 37 | 0.00000047413 |
| Hydrangea macrophylla | Hma1.2p1_0112F.1 | 2 | CH_hma_15 | 6 | 20 | 0.0000000000251921 |
| Lotus japonicus | chr2 | 2 | CH_lja_5 | 9 | 9 | 2.13405e-28 |
| Lonicera japonica | GWHAAZE00000003 | 2 | CH_lonja_316 | 4 | 29 | 0.0000207393 |
| Lonicera japonica | GWHAAZE00000094 | 2 | CH_lonja_46 | 6 | 6 | 8.67749e-17 |
| Lactuca sativa | Lsat_1_v8_lg_3 | 2 | CH_lsa_184 | 5 | 50 | 0.000000141518 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 2 | CH_lsa_262 | 3 | 4 | 0.00000453285 |
| Malus domestica | Chr09 | 2 | CH_mdo_245 | 3 | 3 | 0.00000061692 |
| Manihot esculenta | Chromosome07 | 2 | CH_mes_133 | 4 | 4 | 0.00000000408848 |
| Manihot esculenta | Chromosome17 | 2 | CH_mes_54 | 6 | 8 | 0.0000000000000290076 |
| Manihot esculenta | Chromosome15 | 2 | CH_mes_64 | 6 | 12 | 0.000000000000955632 |
| Nelumbo nucifera | chr3 | 2 | CH_nnu_43 | 4 | 4 | 0.0000000000313346 |
| Nicotiana tabacum | Nitab4.5_0000034 | 2 | CH_nta_146 | 2 | 2 | 0.000329182 |
| Oryza sativa ssp. japonica | chr10 | 2 | CH_osa_91 | 3 | 3 | 0.0000000418381 |
| Petunia axillaris | Peaxi162Scf00174 | 2 | CH_pax_312 | 2 | 2 | 0.000422134 |
| Prunus persica | Pp03 | 2 | CH_ppe_14 | 9 | 9 | 3.30748e-26 |
| Prunus persica | Pp02 | 2 | CH_ppe_295 | 3 | 4 | 0.0000226947 |
| Pisum sativum | chr2LG1 | 2 | CH_psa_86 | 4 | 13 | 0.0000000212927 |
| Papaver somniferum | NW_020620381.1 | 2 | CH_pso_411 | 3 | 4 | 0.0000431761 |
| Papaver somniferum | NW_020624377.1 | 2 | CH_pso_712 | 3 | 9 | 0.000905039 |
| Populus trichocarpa | Chr19 | 2 | CH_ptr_236 | 3 | 3 | 0.0000022802 |
| Populus trichocarpa | Chr08 | 2 | CH_ptr_74 | 5 | 6 | 0.00000000000150814 |
| Phaseolus vulgaris | Chr02 | 2 | CH_pvu_77 | 4 | 4 | 0.00000000014994 |
| Quercus lobata | 6 | 2 | CH_qlo_28 | 10 | 13 | 3.41636e-27 |
| Quercus lobata | CM012294 | 2 | CH_qlo_429 | 4 | 8 | 0.000000211084 |
| Quercus lobata | 10 | 2 | CH_qlo_556 | 3 | 3 | 0.00000615756 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 2 | CH_rch_130 | 5 | 11 | 0.0000000000175047 |
| Rhododendron simsii | chr08 | 2 | CH_rsi_1 | 30 | 34 | 2.43098e-82 |
| Salvia bowleyana | GWHASIU00000004 | 2 | CH_sbo_36 | 6 | 7 | 0.00000000000000119013 |
| Salvia bowleyana | GWHASIU00000002 | 2 | CH_sbo_395 | 4 | 52 | 0.000365092 |
| Salix brachista | GWHAAZH00000019 | 2 | CH_sbr_144 | 3 | 3 | 0.00000131039 |
| Salix brachista | GWHAAZH00000008 | 2 | CH_sbr_68 | 4 | 4 | 0.000000000371602 |
| Sechium edule | LG03 | 2 | CH_sed_126 | 3 | 3 | 0.00000277906 |
| Sechium edule | LG11 | 2 | CH_sed_19 | 6 | 6 | 1.24916e-16 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_577 | 3 | 5 | 0.000000711854 |
| Solanum lycopersicum | SL4.0ch04 | 2 | CH_sly_559 | 2 | 2 | 0.000880411 |
| Solanum lycopersicum | SL4.0ch10 | 2 | CH_sly_560 | 2 | 2 | 0.000880411 |
| Solanum pennellii | Spenn-ch04 | 2 | CH_spe_440 | 2 | 2 | 0.000266874 |
| Solanum tuberosum | ST4.03ch05 | 2 | CH_stu_305 | 3 | 6 | 0.00000944958 |
| Solanum tuberosum | ST4.03ch00 | 2 | CH_stu_407 | 3 | 11 | 0.0000778966 |
| Selenicereus undatus | Scaffold_3410 | 2 | CH_sun_137 | 2 | 2 | 0.0000726639 |
| Trochodendron aralioides | group8 | 2 | CH_tar_1 | 9 | 10 | 2.73873e-26 |
| Trochodendron aralioides | group13 | 2 | CH_tar_190 | 3 | 3 | 0.00000302778 |
| Theobroma cacao | Chromosome_10 | 2 | CH_tca_98 | 4 | 4 | 0.00000000117984 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_227 | 2 | CH_tpr_135 | 3 | 4 | 0.00000120318 |
| Tripterygium wilfordii | NC_052242.1 | 2 | CH_twi_5 | 12 | 32 | 1.07243e-28 |
| Vigna mungo | CM024077.1 | 2 | CH_vmu_125 | 3 | 3 | 0.00000179112 |
| Vigna mungo | CM024074.1 | 2 | CH_vmu_67 | 5 | 28 | 0.0000000164446 |
| Vitis vinifera | chr14 | 2 | CH_vvi_52 | 5 | 5 | 0.0000000000000140618 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |