Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substate adaptor (FBL)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 1 CH_acertr_252 2 2 0.000070497
Camellia sinensis var. sinensis Chr10 1 CH_camsi_954 2 7 0.000962839
Citrus clementina scaffold_6 1 CH_ccl_276 2 2 0.0000820311
Lonicera japonica GWHAAZE00000003 1 CH_lonja_435 2 3 0.000179657
Quercus lobata 7 1 CH_qlo_927 2 3 0.00046464
Sequoiadendron giganteum chr10 1 CH_sgi_718 2 2 0.0000487151
Acer truncatum chr8 2 CH_acertr_252 2 2 0.000070497
Camellia sinensis var. sinensis Chr10 2 CH_camsi_954 2 7 0.000962839
Citrus clementina scaffold_6 2 CH_ccl_276 2 2 0.0000820311
Lonicera japonica GWHAAZE00000003 2 CH_lonja_435 2 3 0.000179657
Quercus lobata 7 2 CH_qlo_927 2 3 0.00046464
Sequoiadendron giganteum chr10 2 CH_sgi_718 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001