Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substate adaptor (LRB)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 1 CH_arhy_620 2 2 0.000449075
Amborella trichopoda AmTr_v1.0_scaffold00116 1 CH_atr_34 6 24 0.000000000000267866
Brassica carinata ChrB01 1 CH_bca_340 3 4 0.000000603133
Camellia sinensis var. sinensis Chr14 1 CH_camsi_636 2 2 0.000137564
Corylus avellana 4 1 CH_cav_339 2 2 0.000230008
Hydrangea macrophylla Hma1.2p1_0384F.1 1 CH_hma_404 2 3 0.000999685
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_542 2 4 0.000925133
Pisum sativum chr3LG5 1 CH_psa_2 7 10 1.52345e-21
Phaseolus vulgaris Chr10 1 CH_pvu_391 2 2 0.000440836
Solanum pennellii Spenn-ch08 1 CH_spe_472 2 2 0.00044479
Solanum tuberosum ST4.03ch08 1 CH_stu_176 3 3 0.000000137873
Vigna mungo CM024078.1 1 CH_vmu_375 2 3 0.000581496
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 2 CH_arhy_620 2 2 0.000449075
Amborella trichopoda AmTr_v1.0_scaffold00116 2 CH_atr_34 6 24 0.000000000000267866
Brassica carinata ChrB01 2 CH_bca_340 3 4 0.000000603133
Camellia sinensis var. sinensis Chr14 2 CH_camsi_636 2 2 0.000137564
Corylus avellana 4 2 CH_cav_339 2 2 0.000230008
Hydrangea macrophylla Hma1.2p1_0384F.1 2 CH_hma_404 2 3 0.000999685
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_542 2 4 0.000925133
Pisum sativum chr3LG5 2 CH_psa_2 7 10 1.52345e-21
Phaseolus vulgaris Chr10 2 CH_pvu_391 2 2 0.000440836
Solanum pennellii Spenn-ch08 2 CH_spe_472 2 2 0.00044479
Solanum tuberosum ST4.03ch08 2 CH_stu_176 3 3 0.000000137873
Vigna mungo CM024078.1 2 CH_vmu_375 2 3 0.000581496

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001