Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.ATPase components.regulatory component RPT3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB01 1 CH_bca_844 2 2 0.000320646
Glycine max Gm11 1 CH_gma_366 2 2 0.000113867
Solanum lycopersicum SL4.0ch06 1 CH_sly_453 2 4 0.000352144
Selaginella moellendorffii scaffold_73 1 CH_smo_56 3 9 0.0000109776
Solanum pennellii Spenn-ch06 1 CH_spe_333 2 3 0.000133434
Solanum tuberosum ST4.03ch06 1 CH_stu_626 2 4 0.000922336
Theobroma cacao Chromosome_10 1 CH_tca_318 2 3 0.000219708
Brassica carinata ChrB01 2 CH_bca_844 2 2 0.000320646
Glycine max Gm11 2 CH_gma_366 2 2 0.000113867
Solanum lycopersicum SL4.0ch06 2 CH_sly_453 2 4 0.000352144
Selaginella moellendorffii scaffold_73 2 CH_smo_56 3 9 0.0000109776
Solanum pennellii Spenn-ch06 2 CH_spe_333 2 3 0.000133434
Solanum tuberosum ST4.03ch06 2 CH_stu_626 2 4 0.000922336
Theobroma cacao Chromosome_10 2 CH_tca_318 2 3 0.000219708

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001