Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID7

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-1 1 CH_aar_41 4 5 0.00000000017086
Brassica carinata ChrB07 1 CH_bca_1149 2 2 0.000961939
Cardamine hirsuta Chr8 1 CH_chi_143 3 4 0.000000573272
Cucumis sativus L. chr4 1 CH_csa_249 2 2 0.000250428
Erythranthe guttata scaffold_13 1 CH_egut_6 12 53 1.72837e-27
Aethionema arabicum LG-1 2 CH_aar_41 4 5 0.00000000017086
Brassica carinata ChrB07 2 CH_bca_1149 2 2 0.000961939
Cardamine hirsuta Chr8 2 CH_chi_143 3 4 0.000000573272
Cucumis sativus L. chr4 2 CH_csa_249 2 2 0.000250428
Erythranthe guttata scaffold_13 2 CH_egut_6 12 53 1.72837e-27
Lotus japonicus Contig00049 2 CH_lja_362 2 2 0.000429046

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001