Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (RAD23)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_500 2 3 0.000807658
Gossypium hirsutum D13 1 CH_ghi_123 4 4 0.0000000000571719
Gossypium hirsutum A13 1 CH_ghi_141 4 5 0.000000000285825
Gossypium raimondii Chr13 1 CH_gra_77 4 5 0.0000000000808926
Quercus lobata CM012294 1 CH_qlo_930 2 3 0.00046464
Vanilla planifolia CM028155.1 1 CH_vpl_66 4 45 0.000000899182
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_500 2 3 0.000807658
Gossypium hirsutum D13 2 CH_ghi_123 4 4 0.0000000000571719
Gossypium hirsutum A13 2 CH_ghi_141 4 5 0.000000000285825
Gossypium raimondii Chr13 2 CH_gra_77 4 5 0.0000000000808926
Quercus lobata CM012294 2 CH_qlo_930 2 3 0.00046464
Vanilla planifolia CM028155.1 2 CH_vpl_66 4 45 0.000000899182

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001