Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.proteolysis.serine-type peptidase activities.S49-class plastidial protease (SppA)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00006 1 CH_atr_198 2 2 0.0000794407
Camellia sinensis var. sinensis Chr15 1 CH_camsi_663 2 2 0.000137564
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_448 2 5 0.000448692
Erythranthe guttata scaffold_4 1 CH_egut_309 2 2 0.0000728147
Fragaria vesca Fvb5 1 CH_fve_276 2 2 0.0000589102
Helianthus annuus HanXRQChr05 1 CH_han_244 3 6 0.000000179178
Lactuca sativa Lsat_1_v8_lg_5 1 CH_lsa_218 3 11 0.000000653784
Olea europaea chr10 1 CH_oeu_178 2 2 0.0000533789
Physcomitrium patens Chr03 1 CH_ppa_105 2 2 0.0000612726
Quercus lobata 10 1 CH_qlo_953 2 5 0.000516249
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_489 2 2 0.0000398653
Trifolium pratense Tp57577_TGAC_v2_LG5 1 CH_tpr_321 2 2 0.000227092
Vitis vinifera chr17 1 CH_vvi_286 2 2 0.000076063
Amborella trichopoda AmTr_v1.0_scaffold00006 2 CH_atr_198 2 2 0.0000794407
Camellia sinensis var. sinensis Chr15 2 CH_camsi_663 2 2 0.000137564
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_448 2 5 0.000448692
Erythranthe guttata scaffold_4 2 CH_egut_309 2 2 0.0000728147
Fragaria vesca Fvb5 2 CH_fve_276 2 2 0.0000589102
Helianthus annuus HanXRQChr05 2 CH_han_244 3 6 0.000000179178
Lactuca sativa Lsat_1_v8_lg_5 2 CH_lsa_218 3 11 0.000000653784
Olea europaea chr10 2 CH_oeu_178 2 2 0.0000533789
Physcomitrium patens Chr03 2 CH_ppa_105 2 2 0.0000612726
Quercus lobata 10 2 CH_qlo_953 2 5 0.000516249
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_489 2 2 0.0000398653
Trifolium pratense Tp57577_TGAC_v2_LG5 2 CH_tpr_321 2 2 0.000227092
Vitis vinifera chr17 2 CH_vvi_286 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001