Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.RUB deconjugation.COP9 signalosome complex.component CSN1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr3 1 CH_camsi_717 2 2 0.000275128
Carya illinoinensis Chr02 1 CH_cil_343 2 2 0.0000619828
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_466 2 2 0.0000398653
Sequoiadendron giganteum chr10 1 CH_sgi_757 2 2 0.0000487151
Camellia sinensis var. sinensis Chr3 2 CH_camsi_717 2 2 0.000275128
Carya illinoinensis Chr02 2 CH_cil_343 2 2 0.0000619828
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_466 2 2 0.0000398653
Sequoiadendron giganteum chr10 2 CH_sgi_757 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001