Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ubiquitin ligase complexes.BTB/POZ substrate adaptor activities.substrate adaptor (SETH6)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr13 | 1 | CH_camsi_715 | 2 | 2 | 0.000275128 |
| Nelumbo nucifera | chr3 | 1 | CH_nnu_453 | 2 | 4 | 0.00078477 |
| Olea europaea | chr16 | 1 | CH_oeu_362 | 2 | 5 | 0.000533746 |
| Camellia sinensis var. sinensis | Chr13 | 2 | CH_camsi_715 | 2 | 2 | 0.000275128 |
| Nelumbo nucifera | chr3 | 2 | CH_nnu_453 | 2 | 4 | 0.00078477 |
| Olea europaea | chr16 | 2 | CH_oeu_362 | 2 | 5 | 0.000533746 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |