Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Arg/N-degron pathway.Arg/N-recognin activities.type-I-residues E3 ubiquitin ligase (PRT6)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC03 1 CH_bca_780 2 2 0.000213764
Carica papaya supercontig_228 1 CH_cpa_166 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_1846 1 CH_cqu_198 3 6 0.000000673416
Petunia axillaris Peaxi162Scf00094 1 CH_pax_241 2 2 0.000211067
Brassica carinata ChrC03 2 CH_bca_780 2 2 0.000213764
Carica papaya supercontig_228 2 CH_cpa_166 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_1846 2 CH_cqu_198 3 6 0.000000673416
Petunia axillaris Peaxi162Scf00094 2 CH_pax_241 2 2 0.000211067

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001