Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.Ubc13-Uev1 conjugating E2 complex.component Uev1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 1 CH_ath_338 2 2 0.000286492
Daucus carota DCARv2_Chr6 1 CH_dca_416 2 2 0.000637775
Gossypium hirsutum D11 1 CH_ghi_272 3 3 0.000000235284
Gossypium raimondii Chr07 1 CH_gra_145 3 3 0.000000241431
Lupinus albus Lalb_Chr21 1 CH_lal_84 3 3 0.0000000826343
Punica granatum NC_045128.1 1 CH_pgr_267 2 2 0.000225107
Salvia bowleyana GWHASIU00000003 1 CH_sbo_325 2 2 0.000136494
Selenicereus undatus Scaffold_33675 1 CH_sun_189 2 2 0.000217992
Arabidopsis thaliana Chr1 2 CH_ath_338 2 2 0.000286492
Daucus carota DCARv2_Chr6 2 CH_dca_416 2 2 0.000637775
Gossypium hirsutum D11 2 CH_ghi_272 3 3 0.000000235284
Gossypium raimondii Chr07 2 CH_gra_145 3 3 0.000000241431
Lupinus albus Lalb_Chr21 2 CH_lal_84 3 3 0.0000000826343
Punica granatum NC_045128.1 2 CH_pgr_267 2 2 0.000225107
Salvia bowleyana GWHASIU00000003 2 CH_sbo_325 2 2 0.000136494
Selenicereus undatus Scaffold_33675 2 CH_sun_189 2 2 0.000217992

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001