Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.proteolysis.protease inhibitor activities.Cystatin protease inhibitor
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-3 | 1 | CH_aar_121 | 3 | 4 | 0.0000339431 |
| Aethionema arabicum | LG-2 | 1 | CH_aar_29 | 5 | 5 | 0.0000000000032161 |
| Aethionema arabicum | LG-9 | 1 | CH_aar_75 | 4 | 8 | 0.000000378793 |
| Acer truncatum | chr1 | 1 | CH_acertr_168 | 4 | 20 | 0.000000639909 |
| Actinidia chinensis | Lachesis_group24 | 1 | CH_ach_273 | 2 | 2 | 0.000814819 |
| Aquilegia oxysepala | CHR01 | 1 | CH_aox_90 | 3 | 4 | 0.000000771754 |
| Amborella trichopoda | AmTr_v1.0_scaffold00055 | 1 | CH_atr_119 | 3 | 4 | 0.00000132512 |
| Brassica napus | A01 | 1 | CH_bna_405 | 3 | 4 | 0.0000174157 |
| Camellia sinensis var. sinensis | Chr11 | 1 | CH_camsi_390 | 3 | 5 | 0.00000264874 |
| Capsicum annuum | PGAv.1.6.scaffold1263 | 1 | CH_can_89 | 4 | 5 | 0.00000000604519 |
| Cicer arietinum L. | Ca_LG7_v3 | 1 | CH_car_87 | 3 | 4 | 0.00000305246 |
| Citrus clementina | scaffold_5 | 1 | CH_ccl_89 | 4 | 4 | 0.000000000819814 |
| Carya illinoinensis | Chr13 | 1 | CH_cil_259 | 3 | 3 | 0.00000126786 |
| Citrullus lanatus | CG_Chr01 | 1 | CH_cla_10 | 6 | 13 | 0.00000000000019572 |
| Cucumis melo | chr08 | 1 | CH_cme_134 | 4 | 34 | 0.0000135425 |
| Carica papaya | supercontig_34 | 1 | CH_cpa_9 | 5 | 6 | 0.000000000000205852 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1862 | 1 | CH_cqu_238 | 3 | 3 | 0.00000229002 |
| Cucumis sativus L. | chr6 | 1 | CH_csa_139 | 4 | 15 | 0.00000169692 |
| Cucumis sativus L. | chr1 | 1 | CH_csa_167 | 3 | 4 | 0.0000119537 |
| Davidia involucrata | GWHABJS00000007 | 1 | CH_din_208 | 3 | 6 | 0.00000900051 |
| Erythranthe guttata | scaffold_13 | 1 | CH_egut_195 | 3 | 3 | 0.000000668073 |
| Gossypium hirsutum | A06 | 1 | CH_ghi_154 | 4 | 4 | 0.000000000722502 |
| Gossypium hirsutum | A09 | 1 | CH_ghi_358 | 3 | 3 | 0.00000245979 |
| Gossypium hirsutum | D06 | 1 | CH_ghi_359 | 3 | 3 | 0.00000245979 |
| Glycine max | Gm14 | 1 | CH_gma_262 | 3 | 4 | 0.00000705185 |
| Gossypium raimondii | Chr10 | 1 | CH_gra_206 | 3 | 5 | 0.00000948086 |
| Helianthus annuus | HanXRQChr04 | 1 | CH_han_68 | 5 | 5 | 0.000000000000259318 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 1 | CH_lsa_139 | 4 | 7 | 0.0000000101897 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 1 | CH_lsa_304 | 3 | 6 | 0.0000226543 |
| Malus domestica | Chr05 | 1 | CH_mdo_353 | 3 | 6 | 0.0000156952 |
| Malus domestica | Chr12 | 1 | CH_mdo_406 | 3 | 9 | 0.000065885 |
| Physcomitrium patens | Chr15 | 1 | CH_ppa_338 | 2 | 2 | 0.000919089 |
| Physcomitrium patens | Chr09 | 1 | CH_ppa_339 | 2 | 2 | 0.000919089 |
| Pisum sativum | chr4LG4 | 1 | CH_psa_53 | 4 | 4 | 0.000000000581283 |
| Papaver somniferum | NC_039358.1 | 1 | CH_pso_129 | 4 | 5 | 0.00000000023393 |
| Papaver somniferum | NC_039362.1 | 1 | CH_pso_64 | 5 | 6 | 0.0000000000000347759 |
| Phaseolus vulgaris | Chr03 | 1 | CH_pvu_58 | 5 | 8 | 0.0000000000030832 |
| Quercus lobata | 5 | 1 | CH_qlo_261 | 4 | 5 | 0.000000000433469 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 1 | CH_rch_520 | 4 | 36 | 0.0000663898 |
| Salvia bowleyana | GWHASIU00000006 | 1 | CH_sbo_183 | 3 | 3 | 0.000000683137 |
| Salvia bowleyana | GWHASIU00000004 | 1 | CH_sbo_184 | 3 | 3 | 0.000000683137 |
| Sechium edule | LG01 | 1 | CH_sed_158 | 3 | 5 | 0.0000167872 |
| Sechium edule | LG14 | 1 | CH_sed_159 | 3 | 5 | 0.0000167872 |
| Sapria himalayana | scaffold52_3862006 | 1 | CH_shi_196 | 2 | 4 | 0.000343063 |
| Solanum tuberosum | ST4.03ch04 | 1 | CH_stu_223 | 3 | 3 | 0.000000649971 |
| Solanum tuberosum | ST4.03ch06 | 1 | CH_stu_224 | 3 | 3 | 0.000000649971 |
| Vanilla planifolia | CM028162.1 | 1 | CH_vpl_108 | 3 | 5 | 0.00000982281 |
| Aethionema arabicum | LG-3 | 2 | CH_aar_121 | 3 | 4 | 0.0000339431 |
| Aethionema arabicum | LG-2 | 2 | CH_aar_29 | 5 | 5 | 0.0000000000032161 |
| Aethionema arabicum | LG-9 | 2 | CH_aar_75 | 4 | 8 | 0.000000378793 |
| Acer truncatum | chr1 | 2 | CH_acertr_168 | 4 | 20 | 0.000000639909 |
| Actinidia chinensis | Lachesis_group24 | 2 | CH_ach_273 | 2 | 2 | 0.000814819 |
| Aquilegia oxysepala | CHR01 | 2 | CH_aox_90 | 3 | 4 | 0.000000771754 |
| Amborella trichopoda | AmTr_v1.0_scaffold00055 | 2 | CH_atr_119 | 3 | 4 | 0.00000132512 |
| Camellia sinensis var. sinensis | Chr11 | 2 | CH_camsi_390 | 3 | 5 | 0.00000264874 |
| Capsicum annuum | PGAv.1.6.scaffold1263 | 2 | CH_can_89 | 4 | 5 | 0.00000000604519 |
| Cicer arietinum L. | Ca_LG7_v3 | 2 | CH_car_87 | 3 | 4 | 0.00000305246 |
| Citrus clementina | scaffold_5 | 2 | CH_ccl_89 | 4 | 4 | 0.000000000819814 |
| Carya illinoinensis | Chr13 | 2 | CH_cil_259 | 3 | 3 | 0.00000126786 |
| Citrullus lanatus | CG_Chr01 | 2 | CH_cla_10 | 6 | 13 | 0.00000000000019572 |
| Cucumis melo | chr08 | 2 | CH_cme_134 | 4 | 34 | 0.0000135425 |
| Carica papaya | supercontig_34 | 2 | CH_cpa_9 | 5 | 6 | 0.000000000000205852 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1862 | 2 | CH_cqu_238 | 3 | 3 | 0.00000229002 |
| Cucumis sativus L. | chr6 | 2 | CH_csa_139 | 4 | 15 | 0.00000169692 |
| Cucumis sativus L. | chr1 | 2 | CH_csa_167 | 3 | 4 | 0.0000119537 |
| Davidia involucrata | GWHABJS00000007 | 2 | CH_din_208 | 3 | 6 | 0.00000900051 |
| Eucalyptus grandis | Chr05 | 2 | CH_egr_309 | 4 | 5 | 0.000000000992289 |
| Erythranthe guttata | scaffold_13 | 2 | CH_egut_195 | 3 | 3 | 0.000000668073 |
| Gossypium hirsutum | A06 | 2 | CH_ghi_154 | 4 | 4 | 0.000000000722502 |
| Gossypium hirsutum | A09 | 2 | CH_ghi_358 | 3 | 3 | 0.00000245979 |
| Gossypium hirsutum | D06 | 2 | CH_ghi_359 | 3 | 3 | 0.00000245979 |
| Glycine max | Gm14 | 2 | CH_gma_262 | 3 | 4 | 0.00000705185 |
| Gossypium raimondii | Chr10 | 2 | CH_gra_206 | 3 | 5 | 0.00000948086 |
| Helianthus annuus | HanXRQChr04 | 2 | CH_han_68 | 5 | 5 | 0.000000000000259318 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 2 | CH_lsa_139 | 4 | 7 | 0.0000000101897 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 2 | CH_lsa_304 | 3 | 6 | 0.0000226543 |
| Malus domestica | Chr05 | 2 | CH_mdo_353 | 3 | 6 | 0.0000156952 |
| Malus domestica | Chr12 | 2 | CH_mdo_406 | 3 | 9 | 0.000065885 |
| Physcomitrium patens | Chr15 | 2 | CH_ppa_338 | 2 | 2 | 0.000919089 |
| Physcomitrium patens | Chr09 | 2 | CH_ppa_339 | 2 | 2 | 0.000919089 |
| Pisum sativum | chr4LG4 | 2 | CH_psa_53 | 4 | 4 | 0.000000000581283 |
| Papaver somniferum | NC_039358.1 | 2 | CH_pso_129 | 4 | 5 | 0.00000000023393 |
| Papaver somniferum | NC_039362.1 | 2 | CH_pso_64 | 5 | 6 | 0.0000000000000347759 |
| Phaseolus vulgaris | Chr03 | 2 | CH_pvu_58 | 5 | 8 | 0.0000000000030832 |
| Quercus lobata | 5 | 2 | CH_qlo_261 | 4 | 5 | 0.000000000433469 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 2 | CH_rch_520 | 4 | 36 | 0.0000663898 |
| Salvia bowleyana | GWHASIU00000006 | 2 | CH_sbo_183 | 3 | 3 | 0.000000683137 |
| Salvia bowleyana | GWHASIU00000004 | 2 | CH_sbo_184 | 3 | 3 | 0.000000683137 |
| Sechium edule | LG01 | 2 | CH_sed_158 | 3 | 5 | 0.0000167872 |
| Sechium edule | LG14 | 2 | CH_sed_159 | 3 | 5 | 0.0000167872 |
| Sapria himalayana | scaffold52_3862006 | 2 | CH_shi_196 | 2 | 4 | 0.000343063 |
| Solanum tuberosum | ST4.03ch04 | 2 | CH_stu_223 | 3 | 3 | 0.000000649971 |
| Solanum tuberosum | ST4.03ch06 | 2 | CH_stu_224 | 3 | 3 | 0.000000649971 |
| Vanilla planifolia | CM028162.1 | 2 | CH_vpl_108 | 3 | 5 | 0.00000982281 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |