Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (FLY)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 1 CH_arhy_665 2 3 0.000538871
Chenopodium quinoa C_Quinoa_Scaffold_1141 1 CH_cqu_405 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2299 1 CH_cqu_406 2 2 0.000284293
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 2 CH_arhy_665 2 3 0.000538871
Chenopodium quinoa C_Quinoa_Scaffold_1141 2 CH_cqu_405 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2299 2 CH_cqu_406 2 2 0.000284293

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001