Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.adaptor protein exchange factor (CAND1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00099 1 CH_atr_165 2 2 0.0000794407
Brassica carinata ChrC06 1 CH_bca_161 3 3 0.00000000685435
Magnolia biondii Chr06 1 CH_mbi_398 2 4 0.000145695
Salix brachista GWHAAZH00000001 1 CH_sbr_270 2 2 0.000189042
Amborella trichopoda AmTr_v1.0_scaffold00099 2 CH_atr_165 2 2 0.0000794407
Brassica carinata ChrC06 2 CH_bca_161 3 3 0.00000000685435
Magnolia biondii Chr06 2 CH_mbi_398 2 4 0.000145695
Salix brachista GWHAAZH00000001 2 CH_sbr_270 2 2 0.000189042

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001