Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO conjugation E2 enzyme (SCE1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_429 2 3 0.000403835
Erythranthe guttata scaffold_3 1 CH_egut_360 2 2 0.000218444
Gossypium raimondii Chr04 1 CH_gra_409 2 2 0.000536107
Populus trichocarpa Chr14 1 CH_ptr_432 2 2 0.000346801
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_429 2 3 0.000403835
Erythranthe guttata scaffold_3 2 CH_egut_360 2 2 0.000218444
Gossypium hirsutum D08 2 CH_ghi_890 2 2 0.000961256
Gossypium raimondii Chr04 2 CH_gra_409 2 2 0.000536107
Populus trichocarpa Chr14 2 CH_ptr_432 2 2 0.000346801

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001