Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 E3 ubiquitin ligase complexes.substrate adaptor activities.COP1-SPA substrate adaptor subcomplex.component COP1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr5 1 CH_camsi_894 2 4 0.000825322
Cardamine hirsuta Chr4 1 CH_chi_210 2 2 0.0000691204
Hydrangea macrophylla Hma1.2p1_0298F.1 1 CH_hma_328 2 2 0.000333259
Camellia sinensis var. sinensis Chr5 2 CH_camsi_894 2 4 0.000825322
Cardamine hirsuta Chr4 2 CH_chi_210 2 2 0.0000691204
Hydrangea macrophylla Hma1.2p1_0298F.1 2 CH_hma_328 2 2 0.000333259

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001