Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.proteolysis.metallopeptidase activities.aminopeptidase activities.M20-class IAA-amino acid hydrolase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 1 | CH_aag_161 | 2 | 2 | 0.000481541 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 1 | CH_amhyb_261 | 2 | 2 | 0.000841751 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 1 | CH_arhy_166 | 4 | 5 | 0.000000000957847 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 1 | CH_arhy_80 | 5 | 5 | 0.0000000000000372873 |
| Arabidopsis thaliana | Chr5 | 1 | CH_ath_400 | 2 | 3 | 0.000601633 |
| Amborella trichopoda | AmTr_v1.0_scaffold00018 | 1 | CH_atr_144 | 3 | 12 | 0.0000416048 |
| Brassica carinata | ChrB02 | 1 | CH_bca_417 | 3 | 5 | 0.00000383755 |
| Camellia sinensis var. sinensis | Chr4 | 1 | CH_camsi_125 | 5 | 14 | 0.0000000000525091 |
| Cannabis sativa | NC_044379.1 | 1 | CH_cansat_397 | 2 | 2 | 0.000984963 |
| Carya illinoinensis | Chr10 | 1 | CH_cil_279 | 3 | 4 | 0.00000380275 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3100 | 1 | CH_cqu_146 | 4 | 12 | 0.0000000780903 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 1 | CH_eca_521 | 2 | 2 | 0.000942317 |
| Fragaria x ananassa | Fvb6-2 | 1 | CH_fan_242 | 3 | 3 | 0.00000366696 |
| Fragaria x ananassa | Fvb6-1 | 1 | CH_fan_297 | 3 | 4 | 0.0000146644 |
| Fragaria x ananassa | Fvb6-4 | 1 | CH_fan_488 | 3 | 9 | 0.000307585 |
| Fragaria vesca | Fvb6 | 1 | CH_fve_108 | 4 | 6 | 0.0000000125517 |
| Glycine max | Gm08 | 1 | CH_gma_45 | 5 | 7 | 0.000000000000186967 |
| Hydrangea macrophylla | Hma1.2p1_0245F.1 | 1 | CH_hma_59 | 3 | 3 | 0.000000185113 |
| Lotus japonicus | chr3 | 1 | CH_lja_136 | 3 | 3 | 0.000000268461 |
| Lonicera japonica | GWHAAZE00000004 | 1 | CH_lonja_294 | 4 | 24 | 0.00000681756 |
| Malus domestica | Chr14 | 1 | CH_mdo_63 | 5 | 6 | 0.000000000000406432 |
| Medicago truncatula | chr2 | 1 | CH_mtr_194 | 4 | 6 | 0.00000000223095 |
| Prunus persica | Pp07 | 1 | CH_ppe_109 | 4 | 4 | 0.000000000156925 |
| Pisum sativum | chr5LG3 | 1 | CH_psa_58 | 4 | 5 | 0.00000000152208 |
| Pisum sativum | chr4LG4 | 1 | CH_psa_94 | 5 | 39 | 0.0000000408751 |
| Papaver somniferum | NC_039359.1 | 1 | CH_pso_181 | 4 | 10 | 0.0000000130921 |
| Papaver somniferum | NC_039359.1 | 1 | CH_pso_319 | 3 | 3 | 0.00000170434 |
| Quercus lobata | 7 | 1 | CH_qlo_291 | 4 | 5 | 0.00000000147577 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 1 | CH_rch_133 | 4 | 4 | 0.0000000000239498 |
| Salvia bowleyana | GWHASIU00000002 | 1 | CH_sbo_453 | 2 | 2 | 0.00068247 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_49 | 9 | 11 | 2.82986e-26 |
| Sequoiadendron giganteum | chr6 | 1 | CH_sgi_617 | 3 | 3 | 0.00000199351 |
| Theobroma cacao | Chromosome_5 | 1 | CH_tca_306 | 3 | 10 | 0.000115679 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_513 | 1 | CH_tpr_33 | 4 | 5 | 0.0000000000975958 |
| Tripterygium wilfordii | NC_052234.1 | 1 | CH_twi_106 | 3 | 3 | 0.000000559481 |
| Anthoceros agrestis | Sc2ySwM_228 | 2 | CH_aag_161 | 2 | 2 | 0.000481541 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 2 | CH_amhyb_261 | 2 | 2 | 0.000841751 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 2 | CH_arhy_166 | 4 | 5 | 0.000000000957847 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 2 | CH_arhy_80 | 5 | 5 | 0.0000000000000372873 |
| Arabidopsis thaliana | Chr5 | 2 | CH_ath_400 | 2 | 3 | 0.000601633 |
| Amborella trichopoda | AmTr_v1.0_scaffold00018 | 2 | CH_atr_144 | 3 | 12 | 0.0000416048 |
| Brassica carinata | ChrB02 | 2 | CH_bca_417 | 3 | 5 | 0.00000383755 |
| Camellia sinensis var. sinensis | Chr4 | 2 | CH_camsi_125 | 5 | 14 | 0.0000000000525091 |
| Cannabis sativa | NC_044379.1 | 2 | CH_cansat_397 | 2 | 2 | 0.000984963 |
| Carya illinoinensis | Chr10 | 2 | CH_cil_279 | 3 | 4 | 0.00000380275 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3100 | 2 | CH_cqu_146 | 4 | 12 | 0.0000000780903 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 2 | CH_eca_521 | 2 | 2 | 0.000942317 |
| Eucalyptus grandis | Chr11 | 2 | CH_egr_392 | 4 | 9 | 0.0000000249864 |
| Fragaria x ananassa | Fvb6-2 | 2 | CH_fan_242 | 3 | 3 | 0.00000366696 |
| Fragaria x ananassa | Fvb6-1 | 2 | CH_fan_297 | 3 | 4 | 0.0000146644 |
| Fragaria x ananassa | Fvb6-4 | 2 | CH_fan_488 | 3 | 9 | 0.000307585 |
| Fragaria vesca | Fvb6 | 2 | CH_fve_108 | 4 | 6 | 0.0000000125517 |
| Glycine max | Gm08 | 2 | CH_gma_45 | 5 | 7 | 0.000000000000186967 |
| Hydrangea macrophylla | Hma1.2p1_0245F.1 | 2 | CH_hma_59 | 3 | 3 | 0.000000185113 |
| Lotus japonicus | chr3 | 2 | CH_lja_136 | 3 | 3 | 0.000000268461 |
| Lonicera japonica | GWHAAZE00000004 | 2 | CH_lonja_294 | 4 | 24 | 0.00000681756 |
| Malus domestica | Chr14 | 2 | CH_mdo_63 | 5 | 6 | 0.000000000000406432 |
| Prunus persica | Pp07 | 2 | CH_ppe_109 | 4 | 4 | 0.000000000156925 |
| Pisum sativum | chr5LG3 | 2 | CH_psa_58 | 4 | 5 | 0.00000000152208 |
| Pisum sativum | chr4LG4 | 2 | CH_psa_94 | 5 | 39 | 0.0000000408751 |
| Papaver somniferum | NC_039359.1 | 2 | CH_pso_181 | 4 | 10 | 0.0000000130921 |
| Papaver somniferum | NC_039359.1 | 2 | CH_pso_319 | 3 | 3 | 0.00000170434 |
| Quercus lobata | 7 | 2 | CH_qlo_291 | 4 | 5 | 0.00000000147577 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 2 | CH_rch_133 | 4 | 4 | 0.0000000000239498 |
| Salvia bowleyana | GWHASIU00000002 | 2 | CH_sbo_453 | 2 | 2 | 0.00068247 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_49 | 9 | 11 | 2.82986e-26 |
| Sequoiadendron giganteum | chr6 | 2 | CH_sgi_617 | 3 | 3 | 0.00000199351 |
| Theobroma cacao | Chromosome_5 | 2 | CH_tca_306 | 3 | 10 | 0.000115679 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_513 | 2 | CH_tpr_33 | 4 | 5 | 0.0000000000975958 |
| Tripterygium wilfordii | NC_052234.1 | 2 | CH_twi_106 | 3 | 3 | 0.000000559481 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |