Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.proteolysis.serine-type peptidase activities.S8-class protease (subtilisin) families.protease (SBT4)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | sc-23 | 1 | CH_aar_61 | 4 | 6 | 0.0000000169057 |
| Acer truncatum | chr9 | 1 | CH_acertr_492 | 2 | 2 | 0.000422982 |
| Arabidopsis lyrata | scaffold_8 | 1 | CH_aly_22 | 8 | 47 | 0.0000000000000147611 |
| Arabidopsis thaliana | Chr5 | 1 | CH_ath_14 | 8 | 52 | 1.12351e-17 |
| Brassica oleracea | C2 | 1 | CH_bol_71 | 4 | 8 | 0.00000000524089 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 1 | CH_bvu_269 | 2 | 2 | 0.00049675 |
| Cannabis sativa | NC_044375.1 | 1 | CH_cansat_164 | 3 | 5 | 0.00000362089 |
| Corylus avellana | 11 | 1 | CH_cav_38 | 4 | 6 | 0.0000000000202813 |
| Citrus clementina | scaffold_8 | 1 | CH_ccl_32 | 6 | 6 | 1.43473e-16 |
| Carpinus fangiana | Cfa01 | 1 | CH_cfa_56 | 4 | 5 | 0.00000000009774 |
| Cardamine hirsuta | NSCAFA.214I | 1 | CH_chi_152 | 4 | 18 | 0.000000997318 |
| Cardamine hirsuta | Chr8 | 1 | CH_chi_156 | 3 | 3 | 0.00000118251 |
| Citrullus lanatus | CG_Chr07 | 1 | CH_cla_168 | 2 | 2 | 0.000266134 |
| Cucumis melo | chr10 | 1 | CH_cme_29 | 7 | 42 | 0.000000000000652445 |
| Carica papaya | supercontig_81 | 1 | CH_cpa_1 | 10 | 27 | 3.78811e-23 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1280 | 1 | CH_cqu_608 | 2 | 2 | 0.000995025 |
| Capsella rubella | scaffold_8 | 1 | CH_cru_21 | 8 | 41 | 4.30184e-16 |
| Cucumis sativus L. | chr5 | 1 | CH_csa_59 | 4 | 4 | 0.000000000122168 |
| Daucus carota | DCARv2_Chr3 | 1 | CH_dca_48 | 4 | 4 | 0.0000000000544834 |
| Davidia involucrata | GWHABJS00000010 | 1 | CH_din_198 | 3 | 8 | 0.00000735018 |
| Durio zibethinus | NW_019168492.1 | 1 | CH_dzi_161 | 4 | 24 | 0.00000574878 |
| Durio zibethinus | NW_019167926.1 | 1 | CH_dzi_78 | 4 | 8 | 0.0000000380199 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 1 | CH_eca_520 | 2 | 2 | 0.000942317 |
| Erythranthe guttata | scaffold_1 | 1 | CH_egut_89 | 4 | 4 | 0.000000000573364 |
| Erythranthe guttata | scaffold_12 | 1 | CH_egut_90 | 4 | 4 | 0.000000000573364 |
| Eutrema salsugineum | scaffold_2 | 1 | CH_esa_19 | 8 | 42 | 2.7188e-16 |
| Gossypium hirsutum | A10 | 1 | CH_ghi_434 | 3 | 5 | 0.0000312662 |
| Gossypium hirsutum | D06 | 1 | CH_ghi_435 | 3 | 5 | 0.0000312662 |
| Gossypium hirsutum | D10 | 1 | CH_ghi_80 | 5 | 5 | 0.000000000000307806 |
| Glycine max | Gm14 | 1 | CH_gma_220 | 3 | 4 | 0.00000142607 |
| Gossypium raimondii | Chr11 | 1 | CH_gra_23 | 6 | 6 | 4.98838e-17 |
| Helianthus annuus | HanXRQChr14 | 1 | CH_han_686 | 2 | 2 | 0.000579643 |
| Lupinus albus | Lalb_Chr10 | 1 | CH_lal_162 | 3 | 4 | 0.0000292568 |
| Lupinus albus | Lalb_Chr24 | 1 | CH_lal_18 | 6 | 6 | 9.04605e-16 |
| Lupinus albus | Lalb_Chr18 | 1 | CH_lal_61 | 4 | 4 | 0.00000000384048 |
| Lupinus albus | Lalb_Chr01 | 1 | CH_lal_7 | 9 | 16 | 7.61406e-22 |
| Lotus japonicus | Contig00141 | 1 | CH_lja_55 | 5 | 8 | 0.0000000000479252 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 1 | CH_lsa_287 | 3 | 9 | 0.0000116445 |
| Magnolia biondii | Chr12 | 1 | CH_mbi_360 | 3 | 22 | 0.0000544237 |
| Malus domestica | Chr07 | 1 | CH_mdo_171 | 4 | 9 | 0.0000000147275 |
| Malus domestica | Chr02 | 1 | CH_mdo_322 | 3 | 5 | 0.00000616721 |
| Manihot esculenta | Chromosome10 | 1 | CH_mes_58 | 5 | 5 | 0.000000000000208795 |
| Nelumbo nucifera | chr2 | 1 | CH_nnu_465 | 2 | 2 | 0.000915631 |
| Prunus persica | Pp02 | 1 | CH_ppe_146 | 4 | 5 | 0.00000000623131 |
| Prunus persica | Pp02 | 1 | CH_ppe_272 | 3 | 4 | 0.0000121493 |
| Populus trichocarpa | Chr10 | 1 | CH_ptr_198 | 3 | 3 | 0.00000042096 |
| Phaseolus vulgaris | Chr08 | 1 | CH_pvu_23 | 7 | 9 | 3.53266e-19 |
| Quercus lobata | 8 | 1 | CH_qlo_857 | 3 | 7 | 0.000282758 |
| Quercus lobata | 1 | 1 | CH_qlo_926 | 3 | 8 | 0.000452218 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 1 | CH_rch_312 | 4 | 16 | 0.000000471104 |
| Salvia bowleyana | GWHASIU00000002 | 1 | CH_sbo_45 | 5 | 8 | 0.0000000000000850341 |
| Sechium edule | LG07 | 1 | CH_sed_131 | 3 | 3 | 0.00000347383 |
| Sechium edule | LG05 | 1 | CH_sed_132 | 3 | 3 | 0.00000347383 |
| Sequoiadendron giganteum | chr11 | 1 | CH_sgi_138 | 7 | 20 | 1.39786e-16 |
| Schrenkiella parvula | ch6-6 | 1 | CH_spa_85 | 5 | 39 | 0.0000000415381 |
| Theobroma cacao | Chromosome_10 | 1 | CH_tca_67 | 5 | 9 | 0.0000000000349606 |
| Tarenaya hassleriana | NW_010964923.1 | 1 | CH_tha_11 | 5 | 5 | 0.000000000000229786 |
| Tarenaya hassleriana | NW_010968505.1 | 1 | CH_tha_73 | 3 | 3 | 0.000002093 |
| Vigna mungo | CM024073.1 | 1 | CH_vmu_89 | 4 | 15 | 0.0000000772196 |
| Vitis vinifera | chr16 | 1 | CH_vvi_126 | 5 | 13 | 0.000000017078 |
| Vitis vinifera | chr13 | 1 | CH_vvi_19 | 10 | 15 | 5.92075e-24 |
| Vitis vinifera | chr6 | 1 | CH_vvi_296 | 3 | 4 | 0.0000797909 |
| Zea mays | 7 | 1 | CH_zma_153 | 2 | 2 | 0.0000511313 |
| Aethionema arabicum | sc-23 | 2 | CH_aar_61 | 4 | 6 | 0.0000000169057 |
| Acer truncatum | chr9 | 2 | CH_acertr_492 | 2 | 2 | 0.000422982 |
| Arabidopsis lyrata | scaffold_8 | 2 | CH_aly_22 | 8 | 47 | 0.0000000000000147611 |
| Arabidopsis thaliana | Chr5 | 2 | CH_ath_14 | 8 | 52 | 1.12351e-17 |
| Brassica oleracea | C2 | 2 | CH_bol_71 | 4 | 8 | 0.00000000524089 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 2 | CH_bvu_269 | 2 | 2 | 0.00049675 |
| Cannabis sativa | NC_044375.1 | 2 | CH_cansat_164 | 3 | 5 | 0.00000362089 |
| Corylus avellana | 11 | 2 | CH_cav_38 | 4 | 6 | 0.0000000000202813 |
| Citrus clementina | scaffold_8 | 2 | CH_ccl_32 | 6 | 6 | 1.43473e-16 |
| Carpinus fangiana | Cfa01 | 2 | CH_cfa_56 | 4 | 5 | 0.00000000009774 |
| Cardamine hirsuta | NSCAFA.214I | 2 | CH_chi_152 | 4 | 18 | 0.000000997318 |
| Cardamine hirsuta | Chr8 | 2 | CH_chi_156 | 3 | 3 | 0.00000118251 |
| Citrullus lanatus | CG_Chr07 | 2 | CH_cla_168 | 2 | 2 | 0.000266134 |
| Cucumis melo | chr10 | 2 | CH_cme_29 | 7 | 42 | 0.000000000000652445 |
| Carica papaya | supercontig_81 | 2 | CH_cpa_1 | 10 | 27 | 3.78811e-23 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1280 | 2 | CH_cqu_608 | 2 | 2 | 0.000995025 |
| Capsella rubella | scaffold_8 | 2 | CH_cru_21 | 8 | 41 | 4.30184e-16 |
| Cucumis sativus L. | chr5 | 2 | CH_csa_59 | 4 | 4 | 0.000000000122168 |
| Daucus carota | DCARv2_Chr3 | 2 | CH_dca_48 | 4 | 4 | 0.0000000000544834 |
| Davidia involucrata | GWHABJS00000010 | 2 | CH_din_198 | 3 | 8 | 0.00000735018 |
| Durio zibethinus | NW_019168492.1 | 2 | CH_dzi_161 | 4 | 24 | 0.00000574878 |
| Durio zibethinus | NW_019167926.1 | 2 | CH_dzi_78 | 4 | 8 | 0.0000000380199 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 2 | CH_eca_520 | 2 | 2 | 0.000942317 |
| Erythranthe guttata | scaffold_1 | 2 | CH_egut_89 | 4 | 4 | 0.000000000573364 |
| Erythranthe guttata | scaffold_12 | 2 | CH_egut_90 | 4 | 4 | 0.000000000573364 |
| Eutrema salsugineum | scaffold_2 | 2 | CH_esa_19 | 8 | 42 | 2.7188e-16 |
| Gossypium hirsutum | A10 | 2 | CH_ghi_434 | 3 | 5 | 0.0000312662 |
| Gossypium hirsutum | D06 | 2 | CH_ghi_435 | 3 | 5 | 0.0000312662 |
| Gossypium hirsutum | A08 | 2 | CH_ghi_578 | 3 | 8 | 0.000174958 |
| Gossypium hirsutum | D08 | 2 | CH_ghi_579 | 3 | 9 | 0.000174958 |
| Gossypium hirsutum | D10 | 2 | CH_ghi_80 | 5 | 5 | 0.000000000000307806 |
| Glycine max | Gm14 | 2 | CH_gma_220 | 3 | 4 | 0.00000142607 |
| Gossypium raimondii | Chr11 | 2 | CH_gra_23 | 6 | 6 | 4.98838e-17 |
| Helianthus annuus | HanXRQChr14 | 2 | CH_han_686 | 2 | 2 | 0.000579643 |
| Lupinus albus | Lalb_Chr10 | 2 | CH_lal_162 | 3 | 4 | 0.0000292568 |
| Lupinus albus | Lalb_Chr24 | 2 | CH_lal_18 | 6 | 6 | 9.04605e-16 |
| Lupinus albus | Lalb_Chr18 | 2 | CH_lal_61 | 4 | 4 | 0.00000000384048 |
| Lupinus albus | Lalb_Chr01 | 2 | CH_lal_7 | 9 | 16 | 7.61406e-22 |
| Lotus japonicus | Contig00141 | 2 | CH_lja_55 | 5 | 8 | 0.0000000000479252 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 2 | CH_lsa_287 | 3 | 9 | 0.0000116445 |
| Magnolia biondii | Chr12 | 2 | CH_mbi_360 | 3 | 22 | 0.0000544237 |
| Malus domestica | Chr07 | 2 | CH_mdo_171 | 4 | 9 | 0.0000000147275 |
| Malus domestica | Chr02 | 2 | CH_mdo_322 | 3 | 5 | 0.00000616721 |
| Manihot esculenta | Chromosome10 | 2 | CH_mes_58 | 5 | 5 | 0.000000000000208795 |
| Nelumbo nucifera | chr2 | 2 | CH_nnu_465 | 2 | 2 | 0.000915631 |
| Prunus persica | Pp02 | 2 | CH_ppe_146 | 4 | 5 | 0.00000000623131 |
| Prunus persica | Pp02 | 2 | CH_ppe_272 | 3 | 4 | 0.0000121493 |
| Populus trichocarpa | Chr10 | 2 | CH_ptr_198 | 3 | 3 | 0.00000042096 |
| Phaseolus vulgaris | Chr08 | 2 | CH_pvu_23 | 7 | 9 | 3.53266e-19 |
| Quercus lobata | 8 | 2 | CH_qlo_857 | 3 | 7 | 0.000282758 |
| Quercus lobata | 1 | 2 | CH_qlo_926 | 3 | 8 | 0.000452218 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 2 | CH_rch_312 | 4 | 16 | 0.000000471104 |
| Salvia bowleyana | GWHASIU00000002 | 2 | CH_sbo_45 | 5 | 8 | 0.0000000000000850341 |
| Sechium edule | LG07 | 2 | CH_sed_131 | 3 | 3 | 0.00000347383 |
| Sechium edule | LG05 | 2 | CH_sed_132 | 3 | 3 | 0.00000347383 |
| Sequoiadendron giganteum | chr11 | 2 | CH_sgi_138 | 7 | 20 | 1.39786e-16 |
| Schrenkiella parvula | ch6-6 | 2 | CH_spa_85 | 5 | 39 | 0.0000000415381 |
| Theobroma cacao | Chromosome_10 | 2 | CH_tca_67 | 5 | 9 | 0.0000000000349606 |
| Tarenaya hassleriana | NW_010964923.1 | 2 | CH_tha_11 | 5 | 5 | 0.000000000000229786 |
| Tarenaya hassleriana | NW_010968505.1 | 2 | CH_tha_73 | 3 | 3 | 0.000002093 |
| Vigna mungo | CM024073.1 | 2 | CH_vmu_89 | 4 | 15 | 0.0000000772196 |
| Vitis vinifera | chr16 | 2 | CH_vvi_126 | 5 | 13 | 0.000000017078 |
| Vitis vinifera | chr13 | 2 | CH_vvi_19 | 10 | 15 | 5.92075e-24 |
| Vitis vinifera | chr6 | 2 | CH_vvi_296 | 3 | 4 | 0.0000797909 |
| Zea mays | 7 | 2 | CH_zma_153 | 2 | 2 | 0.0000511313 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |