Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.protein quality control.ribosome-associated chaperone activities.co-chaperone (Jjj1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Hydrangea macrophylla Hma1.2p1_0060F.1 1 CH_hma_360 2 2 0.000333259
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_671 2 2 0.000239192
Solanum lycopersicum SL4.0ch03 1 CH_sly_342 2 2 0.0000586941
Solanum pennellii Spenn-ch03 1 CH_spe_294 2 2 0.000044479
Solanum tuberosum ST4.03ch03 1 CH_stu_388 2 2 0.0000512453
Zea mays 10 1 CH_zma_33 4 9 0.0000000000505277
Hydrangea macrophylla Hma1.2p1_0060F.1 2 CH_hma_360 2 2 0.000333259
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_671 2 2 0.000239192
Solanum lycopersicum SL4.0ch03 2 CH_sly_342 2 2 0.0000586941
Solanum pennellii Spenn-ch03 2 CH_spe_294 2 2 0.000044479
Solanum tuberosum ST4.03ch03 2 CH_stu_388 2 2 0.0000512453
Zea mays 10 2 CH_zma_33 4 9 0.0000000000505277

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001