Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.autophagy.phagophore expansion.ATG8-binding cargo receptor activities.cargo receptor protein (NBR1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 1 CH_acertr_84 3 3 0.000000007455
Carya illinoinensis Chr11 1 CH_cil_66 5 8 0.00000000000000619977
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_42 4 5 0.00000000000135533
Erythranthe guttata scaffold_17 1 CH_egut_428 2 2 0.000436888
Malus domestica Chr06 1 CH_mdo_464 2 2 0.000113763
Marchantia polymorpha scaffold_39 1 CH_mpo_27 3 3 0.0000000731891
Medicago truncatula chr4 1 CH_mtr_17 8 9 5.60547e-28
Prunus persica Pp05 1 CH_ppe_329 2 2 0.0000745962
Pisum sativum chr4LG4 1 CH_psa_429 2 3 0.000938886
Populus trichocarpa Chr12 1 CH_ptr_476 2 3 0.000520176
Sapria himalayana scaffold19_10581841 1 CH_shi_95 2 2 0.0000571804
Trifolium pratense Tp57577_TGAC_v2_LG5 1 CH_tpr_58 3 3 0.00000000859546
Zea mays 9 1 CH_zma_252 2 2 0.000511313
Acer truncatum chr9 2 CH_acertr_84 3 3 0.000000007455
Carya illinoinensis Chr11 2 CH_cil_66 5 8 0.00000000000000619977
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_42 4 5 0.00000000000135533
Erythranthe guttata scaffold_17 2 CH_egut_428 2 2 0.000436888
Malus domestica Chr06 2 CH_mdo_464 2 2 0.000113763
Marchantia polymorpha scaffold_39 2 CH_mpo_27 3 3 0.0000000731891
Prunus persica Pp05 2 CH_ppe_329 2 2 0.0000745962
Pisum sativum chr4LG4 2 CH_psa_429 2 3 0.000938886
Populus trichocarpa Chr12 2 CH_ptr_476 2 3 0.000520176
Sapria himalayana scaffold19_10581841 2 CH_shi_95 2 2 0.0000571804
Trifolium pratense Tp57577_TGAC_v2_LG5 2 CH_tpr_58 3 3 0.00000000859546
Zea mays 9 2 CH_zma_252 2 2 0.000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001