Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.protein quality control.cytosolic Hsp70 chaperone system.chaperone (Hsp70)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr12 | 1 | CH_acertr_120 | 5 | 57 | 0.0000000431667 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_10 | 1 | CH_amhyb_240 | 2 | 2 | 0.000505051 |
| Arabidopsis thaliana | Chr5 | 1 | CH_ath_405 | 2 | 2 | 0.000601633 |
| Cannabis sativa | NC_044374.1 | 1 | CH_cansat_405 | 2 | 2 | 0.000984963 |
| Cannabis sativa | NC_044371.1 | 1 | CH_cansat_406 | 2 | 2 | 0.000984963 |
| Cardamine hirsuta | Chr3 | 1 | CH_chi_78 | 4 | 6 | 0.00000000187196 |
| Carya illinoinensis | Chr01 | 1 | CH_cil_95 | 6 | 14 | 0.00000000000114468 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 1 | CH_eca_172 | 4 | 24 | 0.000000603312 |
| Fragaria vesca | Fvb5 | 1 | CH_fve_484 | 3 | 22 | 0.000958665 |
| Lotus japonicus | chr1 | 1 | CH_lja_82 | 6 | 69 | 0.00000000459723 |
| Lonicera japonica | GWHAAZE00000002 | 1 | CH_lonja_231 | 3 | 3 | 0.000000451913 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 1 | CH_lsa_130 | 4 | 7 | 0.00000000470351 |
| Malus domestica | Chr07 | 1 | CH_mdo_260 | 3 | 4 | 0.00000103527 |
| Papaver somniferum | NC_039358.1 | 1 | CH_pso_133 | 6 | 37 | 0.000000000272561 |
| Papaver somniferum | NC_039366.1 | 1 | CH_pso_376 | 3 | 4 | 0.0000150935 |
| Papaver somniferum | NW_020648748.1 | 1 | CH_pso_460 | 3 | 7 | 0.000131967 |
| Populus trichocarpa | Chr08 | 1 | CH_ptr_174 | 4 | 11 | 0.0000000944962 |
| Populus trichocarpa | Chr10 | 1 | CH_ptr_325 | 3 | 8 | 0.0000616717 |
| Quercus lobata | 8 | 1 | CH_qlo_216 | 7 | 72 | 0.0000000000248078 |
| Quercus lobata | 1 | 1 | CH_qlo_311 | 4 | 5 | 0.00000000375626 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 1 | CH_rch_544 | 4 | 69 | 0.000116248 |
| Rhododendron simsii | chr03 | 1 | CH_rsi_140 | 4 | 5 | 0.00000000550082 |
| Rhododendron simsii | chr13 | 1 | CH_rsi_98 | 5 | 10 | 0.0000000000982907 |
| Salix brachista | GWHAAZH00000008 | 1 | CH_sbr_182 | 3 | 6 | 0.0000100014 |
| Selenicereus undatus | Scaffold_33679 | 1 | CH_sun_13 | 4 | 6 | 0.000000000258955 |
| Trochodendron aralioides | group2 | 1 | CH_tar_466 | 3 | 16 | 0.000498221 |
| Acer truncatum | chr12 | 2 | CH_acertr_120 | 5 | 57 | 0.0000000431667 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_10 | 2 | CH_amhyb_240 | 2 | 2 | 0.000505051 |
| Arabidopsis thaliana | Chr5 | 2 | CH_ath_405 | 2 | 2 | 0.000601633 |
| Cannabis sativa | NC_044374.1 | 2 | CH_cansat_405 | 2 | 2 | 0.000984963 |
| Cannabis sativa | NC_044371.1 | 2 | CH_cansat_406 | 2 | 2 | 0.000984963 |
| Cardamine hirsuta | Chr3 | 2 | CH_chi_78 | 4 | 6 | 0.00000000187196 |
| Carya illinoinensis | Chr01 | 2 | CH_cil_95 | 6 | 14 | 0.00000000000114468 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 2 | CH_eca_172 | 4 | 24 | 0.000000603312 |
| Fragaria vesca | Fvb5 | 2 | CH_fve_484 | 3 | 22 | 0.000958665 |
| Lotus japonicus | chr1 | 2 | CH_lja_82 | 6 | 69 | 0.00000000459723 |
| Lonicera japonica | GWHAAZE00000002 | 2 | CH_lonja_231 | 3 | 3 | 0.000000451913 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 2 | CH_lsa_130 | 4 | 7 | 0.00000000470351 |
| Malus domestica | Chr07 | 2 | CH_mdo_260 | 3 | 4 | 0.00000103527 |
| Papaver somniferum | NC_039358.1 | 2 | CH_pso_133 | 6 | 37 | 0.000000000272561 |
| Papaver somniferum | NC_039366.1 | 2 | CH_pso_376 | 3 | 4 | 0.0000150935 |
| Papaver somniferum | NW_020648748.1 | 2 | CH_pso_460 | 3 | 7 | 0.000131967 |
| Populus trichocarpa | Chr08 | 2 | CH_ptr_174 | 4 | 11 | 0.0000000944962 |
| Populus trichocarpa | Chr10 | 2 | CH_ptr_325 | 3 | 8 | 0.0000616717 |
| Quercus lobata | 8 | 2 | CH_qlo_216 | 7 | 72 | 0.0000000000248078 |
| Quercus lobata | 1 | 2 | CH_qlo_311 | 4 | 5 | 0.00000000375626 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 2 | CH_rch_544 | 4 | 69 | 0.000116248 |
| Rhododendron simsii | chr03 | 2 | CH_rsi_140 | 4 | 5 | 0.00000000550082 |
| Rhododendron simsii | chr13 | 2 | CH_rsi_98 | 5 | 10 | 0.0000000000982907 |
| Salix brachista | GWHAAZH00000008 | 2 | CH_sbr_182 | 3 | 6 | 0.0000100014 |
| Selenicereus undatus | Scaffold_33679 | 2 | CH_sun_13 | 4 | 6 | 0.000000000258955 |
| Trochodendron aralioides | group2 | 2 | CH_tar_466 | 3 | 16 | 0.000498221 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |