Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.CDC48-NPL4-UFD1 chaperone complex.platform ATPase component CDC48

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 1 CH_aag_167 3 27 0.000563467
Carya illinoinensis Chr13 1 CH_cil_530 2 2 0.000619828
Helianthus annuus HanXRQChr11 1 CH_han_29 7 13 1.54347e-18
Quercus lobata 1 1 CH_qlo_534 3 3 0.00000271892
Quercus lobata 3 1 CH_qlo_725 4 40 0.0000888599
Rhododendron simsii chr13 1 CH_rsi_579 2 2 0.000967961
Anthoceros agrestis Sc2ySwM_228 2 CH_aag_167 3 27 0.000563467
Carya illinoinensis Chr13 2 CH_cil_530 2 2 0.000619828
Eucalyptus grandis Chr11 2 CH_egr_290 4 6 0.000000000315727
Helianthus annuus HanXRQChr11 2 CH_han_29 7 13 1.54347e-18
Quercus lobata 1 2 CH_qlo_534 3 3 0.00000271892
Quercus lobata 3 2 CH_qlo_725 4 40 0.0000888599
Rhododendron simsii chr13 2 CH_rsi_579 2 2 0.000967961

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001