Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.proteolysis.protease inhibitor activities.Serpin protease inhibitor

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-3 1 CH_aar_2 16 53 2.31517e-36
Acer truncatum chr13 1 CH_acertr_434 2 2 0.000211491
Arabidopsis lyrata scaffold_2 1 CH_aly_20 6 7 0.00000000000000244185
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 1 CH_amhyb_150 2 2 0.0000841751
Aquilegia oxysepala CHR04 1 CH_aox_93 4 13 0.0000011041
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 1 CH_arhy_274 3 4 0.000000645288
Arabidopsis thaliana Chr1 1 CH_ath_156 3 3 0.00000044815
Brassica carinata ChrB07 1 CH_bca_123 4 4 0.00000000119916
Brassica carinata ChrC04 1 CH_bca_413 3 3 0.00000373973
Brassica napus C09 1 CH_bna_15 7 13 1.77214e-16
Brassica napus A09 1 CH_bna_344 3 3 0.00000637094
Brassica napus C08 1 CH_bna_72 5 8 0.0000000000478453
Brassica oleracea C8 1 CH_bol_201 3 4 0.0000129711
Brassica oleracea C9 1 CH_bol_23 6 10 0.0000000000000237059
Camellia sinensis var. sinensis Chr4 1 CH_camsi_151 4 9 0.000000000546558
Cannabis sativa NC_044371.1 1 CH_cansat_166 3 4 0.00000426783
Cannabis sativa NC_044371.1 1 CH_cansat_45 5 7 0.00000000000135254
Capsicum annuum PGAv.1.6.scaffold999 1 CH_can_205 3 3 0.00000696127
Capsicum annuum PGAv.1.6.scaffold371 1 CH_can_4 12 23 2.39235e-30
Chara braunii BFEA01000019 1 CH_cbr_41 3 7 0.00000542981
Chara braunii BFEA01000566 1 CH_cbr_49 3 9 0.0000130285
Coffea canephora chr10 1 CH_ccan_282 2 6 0.000255531
Carpinus fangiana Cfa07 1 CH_cfa_94 3 3 0.0000000344157
Cardamine hirsuta Chr2 1 CH_chi_150 5 45 0.000000901026
Cardamine hirsuta Chr4 1 CH_chi_171 3 3 0.00000401335
Cardamine hirsuta Chr2 1 CH_chi_47 5 6 0.00000000000448599
Carya illinoinensis Chr16 1 CH_cil_405 2 3 0.000185943
Citrullus lanatus CG_Chr08 1 CH_cla_130 2 2 0.0000887115
Cucumis melo chr03 1 CH_cme_89 3 3 0.0000000667579
Chenopodium quinoa C_Quinoa_Scaffold_3514 1 CH_cqu_230 3 3 0.0000018859
Chenopodium quinoa C_Quinoa_Scaffold_1846 1 CH_cqu_34 6 7 3.01219e-16
Capsella rubella scaffold_2 1 CH_cru_47 5 6 0.00000000000386146
Cucumis sativus L. chr2 1 CH_csa_112 3 3 0.000000104528
Cucumis sativus L. chr4 1 CH_csa_326 2 2 0.000834759
Daucus carota DCARv2_Chr1 1 CH_dca_61 5 11 0.000000000886705
Daucus carota DCARv2_Chr3 1 CH_dca_70 4 4 0.00000000377103
Daucus carota DCARv2_Chr5 1 CH_dca_9 7 7 4.11035e-19
Davidia involucrata GWHABJS00000011 1 CH_din_132 3 4 0.000000150069
Erigeron canadensis Conyza_canadensis_scaffold:8 1 CH_eca_10 7 10 2.64717e-19
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_189 3 3 0.0000010994
Erythranthe guttata scaffold_3 1 CH_egut_1 13 17 4.50936e-38
Erythranthe guttata scaffold_6 1 CH_egut_394 3 8 0.000248926
Eutrema salsugineum scaffold_8 1 CH_esa_124 3 4 0.0000057395
Fragaria x ananassa Fvb5-1 1 CH_fan_267 5 43 0.00000634027
Fragaria x ananassa Fvb3-3 1 CH_fan_45 5 5 0.00000000000670384
Fragaria vesca Fvb5 1 CH_fve_124 6 48 0.0000000339691
Fragaria vesca Fvb3 1 CH_fve_252 3 4 0.0000478683
Gossypium raimondii Chr10 1 CH_gra_395 2 3 0.000482475
Helianthus annuus HanXRQChr13 1 CH_han_14 9 10 1.00855e-24
Helianthus annuus HanXRQChr05 1 CH_han_183 4 4 0.00000000474443
Helianthus annuus HanXRQChr05 1 CH_han_206 5 18 0.0000000203104
Helianthus annuus HanXRQChr02 1 CH_han_417 3 4 0.0000363618
Hydrangea macrophylla Hma1.2p1_0017F.1 1 CH_hma_40 5 27 0.0000000230962
Hydrangea macrophylla Hma1.2p1_0092F.1 1 CH_hma_90 3 5 0.0000221982
Lupinus albus Lalb_Chr23 1 CH_lal_63 3 3 0.00000000413171
Lotus japonicus chr1 1 CH_lja_29 7 12 0.00000000000000984438
Lactuca sativa Lsat_1_v8_lg_6 1 CH_lsa_339 2 2 0.0000514007
Magnolia biondii Chr16 1 CH_mbi_37 5 6 0.00000000000000525774
Malus domestica Chr08 1 CH_mdo_123 5 11 0.000000000470391
Marchantia polymorpha scaffold_16 1 CH_mpo_107 2 2 0.000331327
Medicago truncatula chr7 1 CH_mtr_355 4 7 0.000000736155
Medicago truncatula chr3 1 CH_mtr_8 14 19 4.14145e-36
Nelumbo nucifera chr6 1 CH_nnu_372 2 2 0.000261609
Nicotiana tabacum Nitab4.5_0000068 1 CH_nta_2 8 18 2.3761e-20
Olea europaea chr14 1 CH_oeu_409 2 2 0.000800683
Oryza sativa ssp. japonica chr11 1 CH_osa_15 9 73 3.99015e-16
Oryza sativa ssp. japonica chr03 1 CH_osa_152 3 3 0.00000341399
Petunia axillaris Peaxi162Scf00126 1 CH_pax_138 3 3 0.00000415808
Petunia axillaris Peaxi162Scf00357 1 CH_pax_15 6 7 0.00000000000000217423
Punica granatum NC_045133.1 1 CH_pgr_77 4 8 0.00000000620719
Prunus persica Pp05 1 CH_ppe_62 5 5 0.0000000000000130081
Papaver somniferum NC_039363.1 1 CH_pso_214 4 4 0.0000000570317
Papaver somniferum NC_039368.1 1 CH_pso_271 4 5 0.000000284958
Papaver somniferum NC_039362.1 1 CH_pso_42 7 8 2.85834e-16
Papaver somniferum NC_039366.1 1 CH_pso_425 3 3 0.0000649248
Papaver somniferum NC_039363.1 1 CH_pso_426 3 3 0.0000649248
Papaver somniferum NC_039358.1 1 CH_pso_47 7 9 0.0000000000000012853
Papaver somniferum NC_039358.1 1 CH_pso_7 15 41 3.50362e-31
Quercus lobata 9 1 CH_qlo_220 4 4 0.0000000000289022
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_140 6 31 0.0000000000449727
Rosa chinensis RcHm_v2.0_Chr5 1 CH_rch_170 4 4 0.000000000736741
Rhododendron simsii chr07 1 CH_rsi_19 11 11 2.09243e-28
Rhododendron simsii chr06 1 CH_rsi_22 12 26 1.99585e-24
Rhododendron simsii chr07 1 CH_rsi_373 3 3 0.00007171
Rhododendron simsii chr09 1 CH_rsi_40 8 10 7.78573e-18
Sequoiadendron giganteum chr3 1 CH_sgi_33 9 15 2.2515e-28
Solanum lycopersicum SL4.0ch04 1 CH_sly_25 7 13 5.52646e-21
Solanum pennellii Spenn-ch04 1 CH_spe_22 6 12 3.61968e-18
Solanum tuberosum ST4.03ch04 1 CH_stu_7 9 19 6.23048e-27
Trochodendron aralioides group5 1 CH_tar_19 5 8 0.0000000000000327395
Theobroma cacao Chromosome_8 1 CH_tca_293 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_LG3 1 CH_tpr_156 3 3 0.00000312875
Trifolium pratense Tp57577_TGAC_v2_scaf_152 1 CH_tpr_2 8 11 2.22304e-21
Tripterygium wilfordii NC_052252.1 1 CH_twi_268 2 3 0.000501733
Utricularia gibba unitig_26 1 CH_ugi_178 2 2 0.0000734592
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_163 3 3 0.00000471484
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_45 5 6 0.00000000000671637
Aethionema arabicum LG-3 2 CH_aar_2 16 53 2.31517e-36
Acer truncatum chr13 2 CH_acertr_434 2 2 0.000211491
Arabidopsis lyrata scaffold_2 2 CH_aly_20 6 7 0.00000000000000244185
Amaranthus hybridus AmaHy_arrow1_Scaffold_5 2 CH_amhyb_150 2 2 0.0000841751
Aquilegia oxysepala CHR04 2 CH_aox_93 4 13 0.0000011041
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 2 CH_arhy_274 3 4 0.000000645288
Arabidopsis thaliana Chr1 2 CH_ath_156 3 3 0.00000044815
Brassica carinata ChrB07 2 CH_bca_123 4 4 0.00000000119916
Brassica carinata ChrC04 2 CH_bca_413 3 3 0.00000373973
Brassica oleracea C8 2 CH_bol_201 3 4 0.0000129711
Brassica oleracea C9 2 CH_bol_23 6 10 0.0000000000000237059
Camellia sinensis var. sinensis Chr4 2 CH_camsi_151 4 9 0.000000000546558
Cannabis sativa NC_044371.1 2 CH_cansat_166 3 4 0.00000426783
Cannabis sativa NC_044371.1 2 CH_cansat_45 5 7 0.00000000000135254
Capsicum annuum PGAv.1.6.scaffold999 2 CH_can_205 3 3 0.00000696127
Capsicum annuum PGAv.1.6.scaffold371 2 CH_can_4 12 23 2.39235e-30
Chara braunii BFEA01000019 2 CH_cbr_41 3 7 0.00000542981
Chara braunii BFEA01000566 2 CH_cbr_49 3 9 0.0000130285
Coffea canephora chr10 2 CH_ccan_282 2 6 0.000255531
Carpinus fangiana Cfa07 2 CH_cfa_94 3 3 0.0000000344157
Cardamine hirsuta Chr2 2 CH_chi_150 5 45 0.000000901026
Cardamine hirsuta Chr4 2 CH_chi_171 3 3 0.00000401335
Cardamine hirsuta Chr2 2 CH_chi_47 5 6 0.00000000000448599
Carya illinoinensis Chr16 2 CH_cil_405 2 3 0.000185943
Citrullus lanatus CG_Chr08 2 CH_cla_130 2 2 0.0000887115
Cucumis melo chr03 2 CH_cme_89 3 3 0.0000000667579
Chenopodium quinoa C_Quinoa_Scaffold_3514 2 CH_cqu_230 3 3 0.0000018859
Chenopodium quinoa C_Quinoa_Scaffold_1846 2 CH_cqu_34 6 7 3.01219e-16
Capsella rubella scaffold_2 2 CH_cru_47 5 6 0.00000000000386146
Cucumis sativus L. chr2 2 CH_csa_112 3 3 0.000000104528
Cucumis sativus L. chr4 2 CH_csa_326 2 2 0.000834759
Daucus carota DCARv2_Chr1 2 CH_dca_61 5 11 0.000000000886705
Daucus carota DCARv2_Chr3 2 CH_dca_70 4 4 0.00000000377103
Daucus carota DCARv2_Chr5 2 CH_dca_9 7 7 4.11035e-19
Davidia involucrata GWHABJS00000011 2 CH_din_132 3 4 0.000000150069
Erigeron canadensis Conyza_canadensis_scaffold:8 2 CH_eca_10 7 10 2.64717e-19
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_189 3 3 0.0000010994
Eucalyptus grandis Chr06 2 CH_egr_346 3 3 0.00000000513834
Erythranthe guttata scaffold_3 2 CH_egut_1 13 17 4.50936e-38
Erythranthe guttata scaffold_6 2 CH_egut_394 3 8 0.000248926
Eutrema salsugineum scaffold_8 2 CH_esa_124 3 4 0.0000057395
Fragaria x ananassa Fvb5-1 2 CH_fan_267 5 43 0.00000634027
Fragaria x ananassa Fvb3-3 2 CH_fan_45 5 5 0.00000000000670384
Fragaria vesca Fvb5 2 CH_fve_124 6 48 0.0000000339691
Fragaria vesca Fvb3 2 CH_fve_252 3 4 0.0000478683
Gossypium hirsutum D06 2 CH_ghi_865 2 3 0.000801015
Gossypium raimondii Chr10 2 CH_gra_395 2 3 0.000482475
Helianthus annuus HanXRQChr13 2 CH_han_14 9 10 1.00855e-24
Helianthus annuus HanXRQChr05 2 CH_han_183 4 4 0.00000000474443
Helianthus annuus HanXRQChr05 2 CH_han_206 5 18 0.0000000203104
Helianthus annuus HanXRQChr02 2 CH_han_417 3 4 0.0000363618
Hydrangea macrophylla Hma1.2p1_0017F.1 2 CH_hma_40 5 27 0.0000000230962
Hydrangea macrophylla Hma1.2p1_0092F.1 2 CH_hma_90 3 5 0.0000221982
Lupinus albus Lalb_Chr23 2 CH_lal_63 3 3 0.00000000413171
Lotus japonicus chr1 2 CH_lja_29 7 12 0.00000000000000984438
Lactuca sativa Lsat_1_v8_lg_6 2 CH_lsa_339 2 2 0.0000514007
Magnolia biondii Chr16 2 CH_mbi_37 5 6 0.00000000000000525774
Malus domestica Chr08 2 CH_mdo_123 5 11 0.000000000470391
Marchantia polymorpha scaffold_16 2 CH_mpo_107 2 2 0.000331327
Nelumbo nucifera chr6 2 CH_nnu_372 2 2 0.000261609
Nicotiana tabacum Nitab4.5_0000068 2 CH_nta_2 8 18 2.3761e-20
Olea europaea chr14 2 CH_oeu_409 2 2 0.000800683
Oryza sativa ssp. japonica chr11 2 CH_osa_15 9 73 3.99015e-16
Oryza sativa ssp. japonica chr03 2 CH_osa_152 3 3 0.00000341399
Petunia axillaris Peaxi162Scf00126 2 CH_pax_138 3 3 0.00000415808
Petunia axillaris Peaxi162Scf00357 2 CH_pax_15 6 7 0.00000000000000217423
Punica granatum NC_045133.1 2 CH_pgr_77 4 8 0.00000000620719
Prunus persica Pp05 2 CH_ppe_62 5 5 0.0000000000000130081
Papaver somniferum NC_039363.1 2 CH_pso_214 4 4 0.0000000570317
Papaver somniferum NC_039368.1 2 CH_pso_271 4 5 0.000000284958
Papaver somniferum NC_039362.1 2 CH_pso_42 7 8 2.85834e-16
Papaver somniferum NC_039366.1 2 CH_pso_425 3 3 0.0000649248
Papaver somniferum NC_039363.1 2 CH_pso_426 3 3 0.0000649248
Papaver somniferum NC_039358.1 2 CH_pso_47 7 9 0.0000000000000012853
Papaver somniferum NC_039358.1 2 CH_pso_7 15 41 3.50362e-31
Quercus lobata 9 2 CH_qlo_220 4 4 0.0000000000289022
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_140 6 31 0.0000000000449727
Rosa chinensis RcHm_v2.0_Chr5 2 CH_rch_170 4 4 0.000000000736741
Rhododendron simsii chr07 2 CH_rsi_19 11 11 2.09243e-28
Rhododendron simsii chr06 2 CH_rsi_22 12 26 1.99585e-24
Rhododendron simsii chr07 2 CH_rsi_373 3 3 0.00007171
Rhododendron simsii chr09 2 CH_rsi_40 8 10 7.78573e-18
Sequoiadendron giganteum chr3 2 CH_sgi_33 9 15 2.2515e-28
Solanum lycopersicum SL4.0ch04 2 CH_sly_25 7 13 5.52646e-21
Solanum pennellii Spenn-ch04 2 CH_spe_22 6 12 3.61968e-18
Solanum tuberosum ST4.03ch04 2 CH_stu_7 9 19 6.23048e-27
Trochodendron aralioides group5 2 CH_tar_19 5 8 0.0000000000000327395
Theobroma cacao Chromosome_8 2 CH_tca_293 2 2 0.0000732386
Trifolium pratense Tp57577_TGAC_v2_LG3 2 CH_tpr_156 3 3 0.00000312875
Trifolium pratense Tp57577_TGAC_v2_scaf_152 2 CH_tpr_2 8 11 2.22304e-21
Tripterygium wilfordii NC_052252.1 2 CH_twi_268 2 3 0.000501733
Utricularia gibba unitig_26 2 CH_ugi_178 2 2 0.0000734592
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_163 3 3 0.00000471484
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_45 5 6 0.00000000000671637

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001