Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.N-recognin component GID4/GID10

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 1 CH_acertr_259 2 2 0.000070497
Beta vulgaris Scaffold_0001 1 CH_bvu_166 2 2 0.0000827917
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_93 5 15 0.000000000000341224
Vanilla planifolia CM028150.1 1 CH_vpl_344 2 3 0.000664951
Acer truncatum chr8 2 CH_acertr_259 2 2 0.000070497
Beta vulgaris Scaffold_0001 2 CH_bvu_166 2 2 0.0000827917
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_93 5 15 0.000000000000341224
Vanilla planifolia CM028150.1 2 CH_vpl_344 2 3 0.000664951

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001