Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.proteolysis.metallopeptidase activities.M48 families.zinc metalloprotease (OMA1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr1 1 CH_acertr_85 3 3 0.000000007455
Aquilegia oxysepala CHR05 1 CH_aox_250 4 70 0.000293456
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 1 CH_arhy_176 5 32 0.00000000363022
Beta vulgaris Chr3_EL10_PGA_scaffold7 1 CH_bvu_8 6 6 6.12908e-19
Cannabis sativa NC_044374.1 1 CH_cansat_325 2 4 0.000393959
Cicer arietinum L. Ca_LG6_v3 1 CH_car_78 3 7 0.00000127178
Citrullus lanatus CG_Chr05 1 CH_cla_119 2 2 0.0000887115
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_265 2 2 0.0000448722
Fragaria x ananassa Fvb7-2 1 CH_fan_140 3 3 0.000000112988
Fragaria x ananassa Fvb7-2 1 CH_fan_141 3 3 0.000000112988
Fragaria vesca Fvb7 1 CH_fve_97 3 3 0.00000000520576
Prunus persica Pp02 1 CH_ppe_330 2 2 0.0000745962
Papaver somniferum NC_039361.1 1 CH_pso_149 4 13 0.00000000171495
Papaver somniferum NC_039365.1 1 CH_pso_647 2 2 0.000630652
Quercus lobata 12 1 CH_qlo_967 2 2 0.000516289
Quercus lobata 8 1 CH_qlo_968 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_128 4 4 0.0000000000133054
Rhododendron simsii chr07 1 CH_rsi_88 5 16 0.0000000000317791
Schrenkiella parvula ch6-6 1 CH_spa_205 2 3 0.000236193
Tarenaya hassleriana NW_010966986.1 1 CH_tha_2 7 7 1.09786e-21
Utricularia gibba unitig_92 1 CH_ugi_87 4 44 0.00000241258
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_364 2 2 0.000557543
Acer truncatum chr1 2 CH_acertr_85 3 3 0.000000007455
Aquilegia oxysepala CHR05 2 CH_aox_250 4 70 0.000293456
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 2 CH_arhy_176 5 32 0.00000000363022
Beta vulgaris Chr3_EL10_PGA_scaffold7 2 CH_bvu_8 6 6 6.12908e-19
Cannabis sativa NC_044374.1 2 CH_cansat_325 2 4 0.000393959
Cicer arietinum L. Ca_LG6_v3 2 CH_car_78 3 7 0.00000127178
Citrullus lanatus CG_Chr05 2 CH_cla_119 2 2 0.0000887115
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_265 2 2 0.0000448722
Eucalyptus grandis Chr01 2 CH_egr_675 2 2 0.0000585274
Fragaria x ananassa Fvb7-2 2 CH_fan_140 3 3 0.000000112988
Fragaria x ananassa Fvb7-2 2 CH_fan_141 3 3 0.000000112988
Fragaria vesca Fvb7 2 CH_fve_97 3 3 0.00000000520576
Prunus persica Pp02 2 CH_ppe_330 2 2 0.0000745962
Papaver somniferum NC_039361.1 2 CH_pso_149 4 13 0.00000000171495
Papaver somniferum NC_039365.1 2 CH_pso_647 2 2 0.000630652
Quercus lobata 12 2 CH_qlo_967 2 2 0.000516289
Quercus lobata 8 2 CH_qlo_968 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_128 4 4 0.0000000000133054
Rhododendron simsii chr07 2 CH_rsi_88 5 16 0.0000000000317791
Schrenkiella parvula ch6-6 2 CH_spa_205 2 3 0.000236193
Tarenaya hassleriana NW_010966986.1 2 CH_tha_2 7 7 1.09786e-21
Utricularia gibba unitig_92 2 CH_ugi_87 4 44 0.00000241258
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_364 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001