Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Pro/N-degron pathway.GID ubiquitination complex.component GID5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group15 1 CH_ach_117 2 2 0.000162964
Brassica carinata ChrC08 1 CH_bca_687 2 2 0.000128259
Beta vulgaris Chr4_EL10_PGA_scaffold1 1 CH_bvu_254 2 4 0.000496709
Carica papaya supercontig_84 1 CH_cpa_167 2 2 0.0000950661
Lonicera japonica GWHAAZE00000001 1 CH_lonja_437 2 3 0.000179657
Trochodendron aralioides group1 1 CH_tar_328 2 2 0.00018011
Actinidia chinensis Lachesis_group15 2 CH_ach_117 2 2 0.000162964
Brassica carinata ChrC08 2 CH_bca_687 2 2 0.000128259
Beta vulgaris Chr4_EL10_PGA_scaffold1 2 CH_bvu_254 2 4 0.000496709
Carica papaya supercontig_84 2 CH_cpa_167 2 2 0.0000950661
Lonicera japonica GWHAAZE00000001 2 CH_lonja_437 2 3 0.000179657
Trochodendron aralioides group1 2 CH_tar_328 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001