Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP12-13)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-3 1 CH_aar_193 2 2 0.000273698
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 1 CH_arhy_569 2 2 0.000299383
Daucus carota DCARv2_Chr6 1 CH_dca_351 2 2 0.000382665
Davidia involucrata GWHABJS00000009 1 CH_din_146 3 4 0.000000525223
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_450 2 2 0.000448722
Hydrangea macrophylla Hma1.2p1_0304F.1 1 CH_hma_381 2 2 0.000666519
Magnolia biondii Chr05 1 CH_mbi_435 2 2 0.000145698
Malus domestica Chr12 1 CH_mdo_77 5 10 0.00000000000309372
Vigna mungo CM024073.1 1 CH_vmu_385 2 2 0.000646141
Aethionema arabicum LG-3 2 CH_aar_193 2 2 0.000273698
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 2 CH_arhy_569 2 2 0.000299383
Daucus carota DCARv2_Chr6 2 CH_dca_351 2 2 0.000382665
Davidia involucrata GWHABJS00000009 2 CH_din_146 3 4 0.000000525223
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_450 2 2 0.000448722
Hydrangea macrophylla Hma1.2p1_0304F.1 2 CH_hma_381 2 2 0.000666519
Magnolia biondii Chr05 2 CH_mbi_435 2 2 0.000145698
Malus domestica Chr12 2 CH_mdo_77 5 10 0.00000000000309372
Vigna mungo CM024073.1 2 CH_vmu_385 2 2 0.000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001