Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Helianthus annuus HanXRQChr07 1 CH_han_656 3 4 0.000391005
Magnolia biondii Chr12 1 CH_mbi_251 5 30 0.00000561201
Olea europaea chr4 1 CH_oeu_201 3 3 0.000125059
Helianthus annuus HanXRQChr07 2 CH_han_656 3 4 0.000391005
Magnolia biondii Chr12 2 CH_mbi_251 5 30 0.00000561201
Olea europaea chr4 2 CH_oeu_201 3 3 0.000125059

Available child term results

Ontology identifier Description Number of clusters
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase 16
19.2.2.1.4.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-III ligase 58
19.2.2.1.4.2.3 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.bifunctional co-chaperone and E3 ubiquitin ligase (CHIP) 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001