Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.chloroplast-associated protein degradation (CHLORAD).E3 ubiquitin protein ligase (SP1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold1682 1 CH_can_269 2 2 0.0000826105
Citrus clementina scaffold_3 1 CH_ccl_299 2 2 0.0000820311
Erythranthe guttata scaffold_14 1 CH_egut_162 3 4 0.000000127244
Malus domestica Chr11 1 CH_mdo_610 2 3 0.00034128
Trifolium pratense Tp57577_TGAC_v2_LG1 1 CH_tpr_175 3 20 0.00000979252
Capsicum annuum PGAv.1.6.scaffold1682 2 CH_can_269 2 2 0.0000826105
Citrus clementina scaffold_3 2 CH_ccl_299 2 2 0.0000820311
Erythranthe guttata scaffold_14 2 CH_egut_162 3 4 0.000000127244
Malus domestica Chr11 2 CH_mdo_610 2 3 0.00034128
Trifolium pratense Tp57577_TGAC_v2_LG1 2 CH_tpr_175 3 20 0.00000979252

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001