Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.chloroplast-associated protein degradation (CHLORAD).E3 ubiquitin protein ligase (SP1)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Capsicum annuum | PGAv.1.6.scaffold1682 | 1 | CH_can_269 | 2 | 2 | 0.0000826105 |
Citrus clementina | scaffold_3 | 1 | CH_ccl_299 | 2 | 2 | 0.0000820311 |
Erythranthe guttata | scaffold_14 | 1 | CH_egut_162 | 3 | 4 | 0.000000127244 |
Malus domestica | Chr11 | 1 | CH_mdo_610 | 2 | 3 | 0.00034128 |
Trifolium pratense | Tp57577_TGAC_v2_LG1 | 1 | CH_tpr_175 | 3 | 20 | 0.00000979252 |
Capsicum annuum | PGAv.1.6.scaffold1682 | 2 | CH_can_269 | 2 | 2 | 0.0000826105 |
Citrus clementina | scaffold_3 | 2 | CH_ccl_299 | 2 | 2 | 0.0000820311 |
Erythranthe guttata | scaffold_14 | 2 | CH_egut_162 | 3 | 4 | 0.000000127244 |
Malus domestica | Chr11 | 2 | CH_mdo_610 | 2 | 3 | 0.00034128 |
Trifolium pratense | Tp57577_TGAC_v2_LG1 | 2 | CH_tpr_175 | 3 | 20 | 0.00000979252 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |