Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold588 1 CH_can_255 2 2 0.0000826105
Magnolia biondii Chr17 1 CH_mbi_316 2 2 0.0000485661
Petunia axillaris Peaxi162Scf00362 1 CH_pax_242 2 2 0.000211067
Physcomitrium patens Chr01 1 CH_ppa_202 2 2 0.000367636
Populus trichocarpa Chr02 1 CH_ptr_418 2 2 0.000346801
Solanum lycopersicum SL4.0ch01 1 CH_sly_301 2 2 0.0000586941
Solanum pennellii Spenn-ch01 1 CH_spe_264 2 2 0.000044479
Solanum tuberosum ST4.03ch01 1 CH_stu_362 2 2 0.0000512453
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_310 2 2 0.000278772
Capsicum annuum PGAv.1.6.scaffold588 2 CH_can_255 2 2 0.0000826105
Magnolia biondii Chr17 2 CH_mbi_316 2 2 0.0000485661
Petunia axillaris Peaxi162Scf00362 2 CH_pax_242 2 2 0.000211067
Physcomitrium patens Chr01 2 CH_ppa_202 2 2 0.000367636
Populus trichocarpa Chr02 2 CH_ptr_418 2 2 0.000346801
Solanum lycopersicum SL4.0ch01 2 CH_sly_301 2 2 0.0000586941
Solanum pennellii Spenn-ch01 2 CH_spe_264 2 2 0.000044479
Solanum tuberosum ST4.03ch01 2 CH_stu_362 2 2 0.0000512453
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_310 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001