Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.ubiquitin-proteasome system.26S proteasome.19S regulatory particle.non-ATPase components.regulatory component RPN3
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Capsicum annuum | PGAv.1.6.scaffold588 | 1 | CH_can_255 | 2 | 2 | 0.0000826105 |
Magnolia biondii | Chr17 | 1 | CH_mbi_316 | 2 | 2 | 0.0000485661 |
Petunia axillaris | Peaxi162Scf00362 | 1 | CH_pax_242 | 2 | 2 | 0.000211067 |
Physcomitrium patens | Chr01 | 1 | CH_ppa_202 | 2 | 2 | 0.000367636 |
Populus trichocarpa | Chr02 | 1 | CH_ptr_418 | 2 | 2 | 0.000346801 |
Solanum lycopersicum | SL4.0ch01 | 1 | CH_sly_301 | 2 | 2 | 0.0000586941 |
Solanum pennellii | Spenn-ch01 | 1 | CH_spe_264 | 2 | 2 | 0.000044479 |
Solanum tuberosum | ST4.03ch01 | 1 | CH_stu_362 | 2 | 2 | 0.0000512453 |
Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_310 | 2 | 2 | 0.000278772 |
Capsicum annuum | PGAv.1.6.scaffold588 | 2 | CH_can_255 | 2 | 2 | 0.0000826105 |
Magnolia biondii | Chr17 | 2 | CH_mbi_316 | 2 | 2 | 0.0000485661 |
Petunia axillaris | Peaxi162Scf00362 | 2 | CH_pax_242 | 2 | 2 | 0.000211067 |
Physcomitrium patens | Chr01 | 2 | CH_ppa_202 | 2 | 2 | 0.000367636 |
Populus trichocarpa | Chr02 | 2 | CH_ptr_418 | 2 | 2 | 0.000346801 |
Solanum lycopersicum | SL4.0ch01 | 2 | CH_sly_301 | 2 | 2 | 0.0000586941 |
Solanum pennellii | Spenn-ch01 | 2 | CH_spe_264 | 2 | 2 | 0.000044479 |
Solanum tuberosum | ST4.03ch01 | 2 | CH_stu_362 | 2 | 2 | 0.0000512453 |
Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_310 | 2 | 2 | 0.000278772 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |