Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.E3 ubiquitin ligase component HRD1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr7 1 CH_camsi_695 2 4 0.000275116
Carica papaya supercontig_39 1 CH_cpa_170 2 3 0.0000950661
Rosa chinensis RcHm_v2.0_Chr1 1 CH_rch_645 2 4 0.000239182
Camellia sinensis var. sinensis Chr7 2 CH_camsi_695 2 4 0.000275116
Carica papaya supercontig_39 2 CH_cpa_170 2 3 0.0000950661
Rosa chinensis RcHm_v2.0_Chr1 2 CH_rch_645 2 4 0.000239182

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001