Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-2-18 membrane-recruiting complex.component ATG18

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 1 CH_aag_159 2 2 0.000481541
Carpinus fangiana Cfa02 1 CH_cfa_382 2 2 0.000757346
Carya illinoinensis Chr07 1 CH_cil_324 3 7 0.0000332524
Fragaria vesca Fvb6 1 CH_fve_198 3 4 0.00000174885
Lupinus albus Lalb_Chr06 1 CH_lal_117 3 3 0.00000187993
Malus domestica Chr12 1 CH_mdo_116 4 4 0.000000000297757
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_329 3 4 0.000000800904
Salix brachista GWHAAZH00000002 1 CH_sbr_209 3 7 0.000059559
Anthoceros agrestis Sc2ySwM_362 2 CH_aag_159 2 2 0.000481541
Carpinus fangiana Cfa02 2 CH_cfa_382 2 2 0.000757346
Carya illinoinensis Chr07 2 CH_cil_324 3 7 0.0000332524
Fragaria vesca Fvb6 2 CH_fve_198 3 4 0.00000174885
Lupinus albus Lalb_Chr06 2 CH_lal_117 3 3 0.00000187993
Malus domestica Chr12 2 CH_mdo_116 4 4 0.000000000297757
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_329 3 4 0.000000800904
Salix brachista GWHAAZH00000002 2 CH_sbr_209 3 7 0.000059559

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001