Functional clusters

Information

  • Type MapMan
  • Description Protein homeostasis.proteolysis.serine-type peptidase activities.S9-class plastidial glutamyl peptidase (CGEP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_333 2 2 0.000070497
Brassica carinata ChrC02 1 CH_bca_1084 2 4 0.000769513
Brassica napus C04 1 CH_bna_181 3 5 0.0000000516218
Corylus avellana 2 1 CH_cav_90 3 3 0.0000000352706
Carpinus fangiana Cfa02 1 CH_cfa_91 3 4 0.0000000344144
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_366 2 2 0.000134617
Lonicera japonica GWHAAZE00000002 1 CH_lonja_483 2 2 0.000179662
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_250 2 2 0.0000756974
Acer truncatum chr5 2 CH_acertr_333 2 2 0.000070497
Brassica carinata ChrC02 2 CH_bca_1084 2 4 0.000769513
Corylus avellana 2 2 CH_cav_90 3 3 0.0000000352706
Carpinus fangiana Cfa02 2 CH_cfa_91 3 4 0.0000000344144
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_366 2 2 0.000134617
Eucalyptus grandis Chr08 2 CH_egr_696 2 2 0.0000585274
Lonicera japonica GWHAAZE00000002 2 CH_lonja_483 2 2 0.000179662
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_250 2 2 0.0000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001