Functional clusters
Information
- Type MapMan
- Description Protein homeostasis.protein quality control.ribosome-associated chaperone activities.co-chaperone (ZRF)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-3 | 1 | CH_aar_228 | 2 | 4 | 0.000547345 |
Brassica carinata | ChrB01 | 1 | CH_bca_388 | 3 | 7 | 0.0000020147 |
Brassica oleracea | C3 | 1 | CH_bol_402 | 2 | 3 | 0.000588328 |
Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 1 | CH_bvu_188 | 2 | 2 | 0.0000827917 |
Fragaria vesca | Fvb1 | 1 | CH_fve_434 | 2 | 3 | 0.000530165 |
Gossypium raimondii | Chr10 | 1 | CH_gra_285 | 2 | 3 | 0.000160828 |
Medicago truncatula | chr3 | 1 | CH_mtr_625 | 2 | 2 | 0.000123259 |
Trochodendron aralioides | group0 | 1 | CH_tar_271 | 2 | 2 | 0.0000600366 |
Utricularia gibba | unitig_8 | 1 | CH_ugi_222 | 2 | 2 | 0.000220378 |
Zea mays | 9 | 1 | CH_zma_227 | 2 | 2 | 0.000306788 |
Aethionema arabicum | LG-3 | 2 | CH_aar_228 | 2 | 4 | 0.000547345 |
Brassica carinata | ChrB01 | 2 | CH_bca_388 | 3 | 7 | 0.0000020147 |
Brassica oleracea | C3 | 2 | CH_bol_402 | 2 | 3 | 0.000588328 |
Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 2 | CH_bvu_188 | 2 | 2 | 0.0000827917 |
Fragaria vesca | Fvb1 | 2 | CH_fve_434 | 2 | 3 | 0.000530165 |
Gossypium hirsutum | A06 | 2 | CH_ghi_756 | 2 | 3 | 0.000480613 |
Gossypium hirsutum | D06 | 2 | CH_ghi_757 | 2 | 3 | 0.000480613 |
Gossypium raimondii | Chr10 | 2 | CH_gra_285 | 2 | 3 | 0.000160828 |
Trochodendron aralioides | group0 | 2 | CH_tar_271 | 2 | 2 | 0.0000600366 |
Utricularia gibba | unitig_8 | 2 | CH_ugi_222 | 2 | 2 | 0.000220378 |
Zea mays | 9 | 2 | CH_zma_227 | 2 | 2 | 0.000306788 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |